RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 TAS2R40P59535 323 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 PPP2R5EQ16537 467 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SGO2Q562F6 1265 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 DAB2IPQ5VWQ8 1189 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SERINC5Q86VE9 423 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 KLHDC9Q8NEP7 349 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 IFT81Q8WYA0 676 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 MCEEQ96PE7 176 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 MRPL45Q9BRJ2 306 aaKnown RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 STRIP2Q9ULQ0 834 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 THSD7BQ9C0I4 1608 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 O00370 1275 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 TTI1O43156 1089 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 XPOTO43592 962 aaKnown RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 PHF2O75151 1096 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CD4P01730 458 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ASGR1P07306 291 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CTSHP09668 335 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 RPL7AP62424 266 aaKnown RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 TAP1Q03518 808 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CNGA2Q16280 664 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 KCNA10Q16322 511 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 EMBQ6PCB8 327 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 C3orf20Q8ND61 904 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 NT5C1AQ9BXI3 368 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 NFU1Q9UMS0 254 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CYP3A5P20815 502 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 OGDHQ02218 1023 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 MGAT3Q09327 533 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 TRADDQ15628 312 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CCSAPQ6IQ19 270 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 DCUN1D2Q6PH85 259 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 RHOT1Q8IXI2 618 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CAVIN3Q969G5 261 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 CPXM1Q96SM3 734 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.3
ZNF548-201ENST00000336128 TJP2Q9UDY2 1190 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 LCMT1Q9UIC8 334 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 KIAA1257Q9ULG3 409 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 HPCAL4Q9UM19 191 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 ST3GAL5Q9UNP4 418 aa13.18□□□□□ -0.3
ZNF548-201ENST00000336128 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 PIRO00625 290 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 CHRNA1P02708 482 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 HMGCRP04035 888 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 ERBB2P04626 1255 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
ZNF548-201ENST00000336128 SIX1Q15475 284 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-201ENST00000336128 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 SCN1AP35498 2009 aa13.17□□□□□ -0.3
ZNF548-201ENST00000336128 FSCN2O14926 492 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 RARAP10276 462 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 CHRNA3P32297 505 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 GJC1P36383 396 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-201ENST00000336128 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
ZNF548-201ENST00000336128 DR1Q01658 176 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 SOX4Q06945 474 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-201ENST00000336128 NNTQ13423 1086 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 CUL1Q13616 776 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 XYLT1Q86Y38 959 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 KATNAL2Q8IYT4 538 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
ZNF548-201ENST00000336128 C18orf8Q96DM3 657 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 TRIM51Q9BSJ1 452 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 SYNCQ9H7C4 482 aa13.16□□□□□ -0.3
ZNF548-201ENST00000336128 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms