RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CMTM5Q96DZ9 223 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 SLC40A1Q9NP59 571 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 SARS2Q9NP81 518 aaKnown RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 CYTH3O43739 400 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 CPB1P15086 417 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 MMP14P50281 582 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 CCNG2Q16589 344 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 LRRC23Q53EV4 343 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 LAMB3Q13751 1172 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 CYP4A22Q5TCH4 519 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 SPATA2LQ8IUW3 424 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 ATPAF2Q8N5M1 289 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 RMDN1Q96DB5 314 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 CGRRF1Q99675 332 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 KLC1Q07866 573 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 UBA3Q8TBC4 463 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 PTPRN2Q92932 1015 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 CDY2AQ9Y6F7 541 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 CDY1Q9Y6F8 540 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 LSM8O95777 96 aaKnown RBP17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 ITGB3P05106 788 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 GFAPP14136 432 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 CYP24A1Q07973 514 aa17.85■□□□□ 0.45
TRAPPC11-201ENST00000334690 B2RBV5 119 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 TRIM49D1C9J1S8 452 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 CYP2C9P11712 490 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 ITIH4Q14624 930 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 RFX8Q6ZV50 586 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 EPS8L3Q8TE67 593 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 EGFL8Q99944 293 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 TRIM54Q9BYV2 358 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 CDC42EP4Q9H3Q1 356 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 LMCD1Q9NZU5 365 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 TNPO2O14787 897 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 IL10P22301 178 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 RARRES1P49788 294 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 BACE1P56817 501 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 NOTUMQ6P988 496 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 POTEAQ6S8J7 498 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 PRUNE1Q86TP1 453 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 CD302Q8IX05 232 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 DDIASQ8IXT1 998 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 CALML6Q8TD86 181 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 DTX3LQ8TDB6 740 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 NAT9Q9BTE0 207 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 CAND2O75155 1236 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 RAD51Q06609 339 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 GOLGA7BQ2TAP0 167 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 VDRP11473 427 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 MTM1Q13496 603 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 ELMSAN1Q6PJG2 1045 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 SAMD7Q7Z3H4 446 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 CCNJLQ8IV13 435 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 SLC20A1Q8WUM9 679 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 ASIC4Q96FT7 647 aa17.84■□□□□ 0.45
TRAPPC11-201ENST00000334690 IGF2BP3O00425 579 aaKnown RBP eCLIP17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 ANP32DO95626 131 aa17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 INPP1P49441 399 aa17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 SETD3Q86TU7 594 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 FAM83AQ86UY5 434 aa17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 NUDT12Q9BQG2 462 aa17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 WARS2Q9UGM6 360 aaKnown RBP17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 UBQLN1Q9UMX0 589 aaKnown RBP17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 SNX5Q9Y5X3 404 aa17.83■□□□□ 0.45
TRAPPC11-201ENST00000334690 GNL1P36915 607 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 ABCE1P61221 599 aaKnown RBP17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 MED21Q13503 144 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 NBPF20Q3BBV1 942 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 PRAMEF18Q5VWM3 479 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 KIF2BQ8N4N8 673 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 SH3TC2Q8TF17 1288 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 TASP1Q9H6P5 420 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 TMEM247A6NEH6 219 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 NFIBO00712 420 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 NLRP11P59045 1033 aaKnown RBP17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 VEPH1Q14D04 833 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 TMEM259Q4ZIN3 620 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 NAPEPLDQ6IQ20 393 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 NSL1Q96IY1 281 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 THTPAQ9BU02 230 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 MTMR12Q9C0I1 747 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 ARHGEF38Q9NXL2 777 aa17.83■□□□□ 0.44
TRAPPC11-201ENST00000334690 GRIK1P39086 918 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 TBCCQ15814 346 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 MPZL3Q6UWV2 235 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 SNX19Q92543 992 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 MTMR9Q96QG7 549 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 YY1AP1Q9H869 796 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 AGO4Q9HCK5 861 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 ABCF3Q9NUQ8 709 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 HACL1Q9UJ83 578 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 MYL2P10916 166 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 NNMTP40261 264 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms