RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 ID4P47928 161 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 CASP5P51878 434 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 KPNA1P52294 538 aaPredicted RBP18.69■□□□□ 0.58
TFF3-201ENST00000291525 AMPD3Q01432 767 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 FCHO2Q0JRZ9 810 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 NFE2Q16621 373 aaPredicted RBP18.69■□□□□ 0.58
TFF3-201ENST00000291525 ARHGAP29Q52LW3 1261 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 TMEM86AQ8N2M4 240 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 LRRC52Q8N7C0 313 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 PDILTQ8N807 584 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 NOC3LQ8WTT2 800 aaKnown RBP18.69■□□□□ 0.58
TFF3-201ENST00000291525 SECISBP2LQ93073 1101 aaKnown RBP18.69■□□□□ 0.58
TFF3-201ENST00000291525 ZNF396Q96N95 335 aaPredicted RBP18.69■□□□□ 0.58
TFF3-201ENST00000291525 LPIN3Q9BQK8 851 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 BACH2Q9BYV9 841 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 CUEDC2Q9H467 287 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 TASP1Q9H6P5 420 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 AGAP1Q9UPQ3 857 aa18.69■□□□□ 0.58
TFF3-201ENST00000291525 SHISA7A6NL88 538 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 ARNTLO00327 626 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 SPTLC2O15270 562 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 TMEM191BP0C7N4 346 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 HAPLN1P10915 354 aaPredicted RBP18.68■□□□□ 0.58
TFF3-201ENST00000291525 ATF6P18850 670 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 CCR3P51677 355 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 NRLP54845 237 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 PLCB2Q00722 1185 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 MYL7Q01449 175 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 MTAPQ13126 283 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 FZD5Q13467 585 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 LRRC32Q14392 662 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 STXBP5Q5T5C0 1151 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 MAMSTRQ6ZN01 415 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 GPD1LQ8N335 351 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 C1orf127Q8N9H9 656 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 LINC00301Q8NCQ3 95 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 SPATA18Q8TC71 538 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 LMAN1LQ9HAT1 526 aa18.68■□□□□ 0.58
TFF3-201ENST00000291525 A0A087X0B3 334 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 PPP6R2O75170 966 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 KRT19P08727 400 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 PDIA4P13667 645 aaKnown RBP18.67■□□□□ 0.58
TFF3-201ENST00000291525 CCNE1P24864 410 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 DDX6P26196 483 aaKnown RBP eCLIP18.67■□□□□ 0.58
TFF3-201ENST00000291525 RBP5P82980 135 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 BFSP1Q12934 665 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 SURF1Q15526 300 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 ERMP1Q7Z2K6 904 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 ZNF687Q8N1G0 1237 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 CSGALNACT2Q8N6G5 542 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 SUMF1Q8NBK3 374 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 ZBTB44Q8NCP5 570 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 BPIFB1Q8TDL5 484 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 GIPC2Q8TF65 315 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 LEO1Q8WVC0 666 aaPredicted RBP18.67■□□□□ 0.58
TFF3-201ENST00000291525 RSPRY1Q96DX4 576 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 ANKRD36BP1Q96IX9 119 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 ACBD6Q9BR61 282 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 CBWD1Q9BRT8 395 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 PCIF1Q9H4Z3 704 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 THG1LQ9NWX6 298 aaKnown RBP18.67■□□□□ 0.58
TFF3-201ENST00000291525 NCDNQ9UBB6 729 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 ZNF638Q14966 1978 aaKnown RBP18.67■□□□□ 0.58
TFF3-201ENST00000291525 NCANO14594 1321 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 DMDP11532 3685 aa18.67■□□□□ 0.58
TFF3-201ENST00000291525 DENND4CQ5VZ89 1909 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 GOLGA8IPA6NC78 632 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 GOLGA8JA6NMD2 632 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 PRPF6O94906 941 aaKnown RBP18.66■□□□□ 0.58
TFF3-201ENST00000291525 YEATS4O95619 227 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 CSH1P0DML2 217 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 CSH2P0DML3 217 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 CYP4F8P98187 520 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 MYO1EQ12965 1108 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 LRRTM3Q86VH5 581 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 RALGPS2Q86X27 583 aaPredicted RBP18.66■□□□□ 0.58
TFF3-201ENST00000291525 KIAA2013Q8IYS2 634 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 NELL1Q92832 810 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 ABCB6Q9NP58 842 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 GDAP2Q9NXN4 497 aa18.66■□□□□ 0.58
TFF3-201ENST00000291525 DDX43Q9NXZ2 648 aaKnown RBP18.66■□□□□ 0.58
TFF3-201ENST00000291525 UXTQ9UBK9 157 aaPredicted RBP18.66■□□□□ 0.58
TFF3-201ENST00000291525 EP300Q09472 2414 aaPredicted RBP18.66■□□□□ 0.58
TFF3-201ENST00000291525 SPTBN4Q9H254 2564 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 ZNF233A6NK53 670 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 SLC38A8A6NNN8 435 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 LILRB5O75023 590 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
TFF3-201ENST00000291525 TNNC2P02585 160 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 PCSK1P29120 753 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 LHX1P48742 406 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 RPL10AP62906 217 aaKnown RBP18.65■□□□□ 0.58
TFF3-201ENST00000291525 DGKKQ5KSL6 1271 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 GPR161Q8N6U8 529 aaKnown RBP18.65■□□□□ 0.58
TFF3-201ENST00000291525 CELF5Q8N6W0 485 aaKnown RBP18.65■□□□□ 0.58
TFF3-201ENST00000291525 IQUBQ8NA54 791 aa18.65■□□□□ 0.58
TFF3-201ENST00000291525 ZSWIM2Q8NEG5 633 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms