RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 FBXO47Q5MNV8 452 aa20.08■□□□□ 0.81
VBP1-201ENST00000286428 IPO4Q8TEX9 1081 aaKnown RBP20.08■□□□□ 0.81
VBP1-201ENST00000286428 KRT35Q92764 455 aa20.08■□□□□ 0.81
VBP1-201ENST00000286428 ELOVL4Q9GZR5 314 aa20.08■□□□□ 0.81
VBP1-201ENST00000286428 RAB17Q9H0T7 212 aa20.08■□□□□ 0.81
VBP1-201ENST00000286428 RASAL2Q9UJF2 1139 aa20.08■□□□□ 0.81
VBP1-201ENST00000286428 ST3GAL5Q9UNP4 418 aa20.08■□□□□ 0.81
VBP1-201ENST00000286428 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.08■□□□□ 0.81
VBP1-201ENST00000286428 CASP8AP2Q9UKL3 1982 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 TMEM191CA6NGB0 347 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 PIRO00625 290 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 CAND2O75155 1236 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 CCND3P30281 292 aaPredicted RBP20.07■□□□□ 0.8
VBP1-201ENST00000286428 GUCY2FP51841 1108 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 SLC7A5Q01650 507 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 GUCY2DQ02846 1103 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 NNTQ13423 1086 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 MAP3K21Q5TCX8 1036 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 CCSAPQ6IQ19 270 aaPredicted RBP20.07■□□□□ 0.8
VBP1-201ENST00000286428 DPH6Q7L8W6 267 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 WDTC1Q8N5D0 677 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 SENP6Q9GZR1 1112 aaPredicted RBP20.07■□□□□ 0.8
VBP1-201ENST00000286428 EPB41L5Q9HCM4 733 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 HOMER3Q9NSC5 361 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 SQORQ9Y6N5 450 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 FAM187AA6NFU0 413 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 SIGLEC16A6NMB1 481 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 RAD51CO43502 376 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 TAF6P49848 677 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 RAB27AP51159 221 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 TRIM32Q13049 653 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 PTK7Q13308 1070 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 ZNF211Q13398 564 aaPredicted RBP20.07■□□□□ 0.8
VBP1-201ENST00000286428 CASP8Q14790 479 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 PTGISQ16647 500 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 LRRC38Q5VT99 294 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 LCLAT1Q6UWP7 414 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 FNIP1Q8TF40 1166 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 HDAC7Q8WUI4 952 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 TSEN34Q9BSV6 310 aaKnown RBP20.07■□□□□ 0.8
VBP1-201ENST00000286428 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
VBP1-201ENST00000286428 MOXD2PA6NHM9 499 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 KPNA7A9QM74 516 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 O00370 1275 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 TRPA1O75762 1119 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 MICAL2O94851 1124 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
VBP1-201ENST00000286428 SETSIPP0DME0 302 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 PYGMP11217 842 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 SKIP12755 728 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 ITGA4P13612 1032 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 SSTR3P32745 418 aaPredicted RBP20.06■□□□□ 0.8
VBP1-201ENST00000286428 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
VBP1-201ENST00000286428 ACAP1Q15027 740 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 DENND1BQ6P3S1 775 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 SLC13A5Q86YT5 568 aaPredicted RBP20.06■□□□□ 0.8
VBP1-201ENST00000286428 NIPA2Q8N8Q9 360 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 SMG8Q8ND04 991 aaKnown RBP20.06■□□□□ 0.8
VBP1-201ENST00000286428 FAM105AQ9NUU6 356 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 TUBGCP4Q9UGJ1 667 aa20.06■□□□□ 0.8
VBP1-201ENST00000286428 FEZ2Q9UHY8 353 aaPredicted RBP20.06■□□□□ 0.8
VBP1-201ENST00000286428 M0QYV0 167 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 PODXLO00592 558 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 PHF2O75151 1096 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 ZMYND10O75800 440 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 KRT3P12035 628 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 ELNP15502 786 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 GBP1P32455 592 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 TNNT3P45378 269 aaPredicted RBP20.05■□□□□ 0.8
VBP1-201ENST00000286428 GABRB2P47870 512 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 ODF2Q5BJF6 829 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 GLT1D1Q96MS3 346 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 TRAIPQ9BWF2 469 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 DDX47Q9H0S4 455 aaKnown RBP20.05■□□□□ 0.8
VBP1-201ENST00000286428 HESX1Q9UBX0 185 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 GIT1Q9Y2X7 761 aa20.05■□□□□ 0.8
VBP1-201ENST00000286428 TCRBV5S1A1TA0A578 114 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 GLI1P08151 1106 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 DESP17661 470 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 LRPAP1P30533 357 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 THPOP40225 353 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 PSMC1P62191 440 aaKnown RBP20.04■□□□□ 0.8
VBP1-201ENST00000286428 MGAT3Q09327 533 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 ITGA7Q13683 1181 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 C2CD6Q53TS8 623 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 GLRA4Q5JXX5 417 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 KATNAL2Q8IYT4 538 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 SLAIN1Q8ND83 568 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 APPL2Q8NEU8 664 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 OR6B3Q8NGW1 331 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 EXD1Q8NHP7 514 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 CD99L2Q8TCZ2 262 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 AENQ8WTP8 325 aaKnown RBP20.04■□□□□ 0.8
VBP1-201ENST00000286428 CAVIN3Q969G5 261 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 C18orf25Q96B23 403 aaPredicted RBP20.04■□□□□ 0.8
VBP1-201ENST00000286428 RBM41Q96IZ5 413 aaKnown RBP20.04■□□□□ 0.8
VBP1-201ENST00000286428 MCEEQ96PE7 176 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 TWNKQ96RR1 684 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 SNX25Q9H3E2 840 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms