RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TNIP3Q96KP6 325 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 SEMA6BQ9H3T3 888 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 POLIQ9UNA4 740 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 DTNAQ9Y4J8 743 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 CALB2P22676 271 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 RECQLP46063 649 aaPredicted RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 HMGCS2P54868 508 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 TAGAPQ8N103 731 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 MAGEB18Q96M61 343 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 TRAPPC9Q96Q05 1148 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 RSAD1Q9HA92 442 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 OSGEPQ9NPF4 335 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 FAM49BQ9NUQ9 324 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 ZSCAN5CA6NGD5 496 aaPredicted RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 MYCP01106 439 aaPredicted RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 PTPN4P29074 926 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 RPS6P62753 249 aaKnown RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 SFSWAPQ12872 951 aaKnown RBP17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 TBC1D16Q8TBP0 767 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 AGAP11Q8TF27 550 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 RMI1Q9H9A7 625 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 HECW2Q9P2P5 1572 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 CASP4P49662 377 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 PDIA6Q15084 440 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 IZUMO2Q6UXV1 221 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 KLHL23Q8NBE8 558 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 PNMA3Q9UL41 463 aa17.17■□□□□ 0.34
SH3RF1-201ENST00000284637 ASIC4Q96FT7 647 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 CDYLQ9Y232 598 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 SGPL1O95470 568 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 RAP1GDS1P52306 607 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 TRADDQ15628 312 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 UGP2Q16851 508 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 CDR2LQ86X02 465 aaPredicted RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 TLR2O60603 784 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 RARGP13631 454 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 CDC25CP30307 473 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ADCK1Q86TW2 530 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 UBA3Q8TBC4 463 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 MPP4Q96JB8 637 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 RUSC1Q9BVN2 902 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 CAAP1Q9H8G2 361 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 CNGB3Q9NQW8 809 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 SRP72O76094 671 aaKnown RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 COPAP53621 1224 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ADARP55265 1226 aaKnown RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 NLRP11P59045 1033 aaKnown RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 ABCE1P61221 599 aaKnown RBP17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 TBCCQ15814 346 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 PARVBQ9HBI1 364 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 GIMAP4Q9NUV9 329 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 AP4S1Q9Y587 144 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 V9GYQ6 96 aa17.16■□□□□ 0.34
SH3RF1-201ENST00000284637 SERPINI2O75830 405 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 RBP5P82980 135 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 DMC1Q14565 340 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 DCAF4L1Q3SXM0 396 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 FIGNQ5HY92 759 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 ACAD10Q6JQN1 1059 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 ZNF555Q8NEP9 628 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 HDAC7Q8WUI4 952 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 CDC42EP4Q9H3Q1 356 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 KBTBD4Q9NVX7 518 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 P4HA2O15460 535 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 POLBP06746 335 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 WDR60Q8WVS4 1066 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 CDY2AQ9Y6F7 541 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 CDY1Q9Y6F8 540 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 SLC34A1Q06495 639 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 MTMR2Q13614 643 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 EMC2Q15006 297 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 C1orf131Q8NDD1 294 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 ATP8B4Q8TF62 1192 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 TULP4Q9NRJ4 1543 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 MAP3K6O95382 1288 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 NR3C2P08235 984 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 HMOX2P30519 316 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 PCYOX1LQ8NBM8 494 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 SGF29Q96ES7 293 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 SH3GL2Q99962 352 aa17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 MMTAG2Q9BU76 263 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 METTL5Q9NRN9 209 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
SH3RF1-201ENST00000284637 TPST1O60507 370 aa17.14■□□□□ 0.34
SH3RF1-201ENST00000284637 PLOD1Q02809 727 aaPredicted RBP17.14■□□□□ 0.34
SH3RF1-201ENST00000284637 CDC42EP5Q6NZY7 148 aa17.14■□□□□ 0.34
SH3RF1-201ENST00000284637 ASAP3Q8TDY4 903 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms