RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PRPF4O43172 522 aaKnown RBP eCLIP16.07■□□□□ 0.16
DDX56-201ENST00000258772 ADCY3O60266 1144 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ALADP13716 330 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 CDKN2BP42772 138 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 AP3M2P53677 418 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 SLC18A1P54219 525 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 MYL6P60660 151 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 EN1Q05925 392 aaPredicted RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 FSTL1Q12841 308 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 CAPSQ13938 189 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ZNF394Q53GI3 561 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 CATSPERGQ6ZRH7 1159 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ASRGL1Q7L266 308 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 WDTC1Q8N5D0 677 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 GIMAP7Q8NHV1 300 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 NKD2Q969F2 451 aaPredicted RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 ACSF2Q96CM8 615 aaPredicted RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 HAUS1Q96CS2 278 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 TMEM121Q9BTD3 319 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ZNF518BQ9C0D4 1074 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 TRABDQ9H4I3 376 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 VPS37BQ9H9H4 285 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 DDX56Q9NY93 547 aaKnown RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 LRRD1A4D1F6 860 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ITGAVP06756 1048 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 ZNF772Q68DY9 489 aaPredicted RBP16.07■□□□□ 0.16
DDX56-201ENST00000258772 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ZBED8Q8IZ13 594 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 KIF2BQ8N4N8 673 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 ANKLE1Q8NAG6 615 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 WRNIP1Q96S55 665 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 KIF9Q9HAQ2 790 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 CISHQ9NSE2 258 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 STARD13Q9Y3M8 1113 aa16.07■□□□□ 0.16
DDX56-201ENST00000258772 C19orf81C9J6K1 198 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 FAM189A1O60320 539 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 KRT16P08779 473 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 KRT15P19012 456 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 TAP1Q03518 808 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 SPARCL1Q14515 664 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 TARBP2Q15633 366 aaKnown RBP16.06■□□□□ 0.16
DDX56-201ENST00000258772 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 ZPBP2Q6X784 338 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 ERICH1Q86X53 443 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 MTMR12Q9C0I1 747 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 CXorf56Q9H5V9 222 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 SENP1Q9P0U3 644 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 FZD1Q9UP38 647 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 A0A1B0GUA9 196 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 SGK1O00141 431 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 HGSO14964 777 aaPredicted RBP16.06■□□□□ 0.16
DDX56-201ENST00000258772 IFNB1P01574 187 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 CCNB1P14635 433 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 EIF4BP23588 611 aaKnown RBP16.06■□□□□ 0.16
DDX56-201ENST00000258772 RFC5P40937 340 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 SKIV2L2P42285 1042 aaKnown RBP16.06■□□□□ 0.16
DDX56-201ENST00000258772 GRM1Q13255 1194 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 CAPN12Q6ZSI9 719 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 CENPUQ71F23 418 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 ZBTB33Q86T24 672 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 NIPA2Q8N8Q9 360 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 SMC6Q96SB8 1091 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 PCYT2Q99447 389 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 TCHPQ9BT92 498 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 PCDH9Q9HC56 1237 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 TRIM33Q9UPN9 1127 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 SMG5Q9UPR3 1016 aaKnown RBP16.06■□□□□ 0.16
DDX56-201ENST00000258772 SHOC2Q9UQ13 582 aa16.06■□□□□ 0.16
DDX56-201ENST00000258772 RPS12P25398 132 aaKnown RBP16.05■□□□□ 0.16
DDX56-201ENST00000258772 CDH5P33151 784 aaPredicted RBP16.05■□□□□ 0.16
DDX56-201ENST00000258772 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 PDIA2Q13087 525 aaKnown RBP16.05■□□□□ 0.16
DDX56-201ENST00000258772 DNAJC3Q13217 504 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 SGSM1Q2NKQ1 1148 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 RGS9BPQ6ZS82 235 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 MICALL2Q8IY33 904 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 C4orf33Q8N1A6 199 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 SLC35B2Q8TB61 432 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 AGAP11Q8TF27 550 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 TFAP2BQ92481 460 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 PRCCQ92733 491 aaPredicted RBP16.05■□□□□ 0.16
DDX56-201ENST00000258772 MAF1Q9H063 256 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 PHTF1Q9UMS5 762 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 PCDHGC3Q9UN70 934 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 L3MBTL1Q9Y468 752 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 NDC80O14777 642 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 MSCO60682 206 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 TOM1L1O75674 476 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 RPA3P35244 121 aaPredicted RBP16.05■□□□□ 0.16
DDX56-201ENST00000258772 DUOXA2Q1HG44 320 aa16.05■□□□□ 0.16
DDX56-201ENST00000258772 CYP4A22Q5TCH4 519 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms