RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GCLMP48507 274 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 TNNC1P63316 161 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 STIM1Q13586 685 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 SLC5A9Q2M3M2 681 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ZACNQ401N2 412 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 IQCEQ6IPM2 695 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 KLHL10Q6JEL2 608 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 HS6ST3Q8IZP7 471 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ELMOD1Q8N336 334 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ST13P5Q8NFI4 369 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 SPATA18Q8TC71 538 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ING5Q8WYH8 240 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 FGF13Q92913 245 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 SYAP1Q96A49 352 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 DHTKD1Q96HY7 919 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ZNF512Q96ME7 567 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 SEPT5Q99719 369 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 C1QTNF1Q9BXJ1 281 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 C11orf16Q9NQ32 467 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 EPS15L1Q9UBC2 864 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 CDH7Q9ULB5 785 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 MRPS23Q9Y3D9 190 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 SCN1AP35498 2009 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ATP2C2O75185 946 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 PDGFRBP09619 1106 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 EPB41P11171 864 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 WARSP23381 471 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 CCNE1P24864 410 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 PCSK1P29120 753 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 EPHB3P54753 998 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 ZXDAP98168 799 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 FKBP3Q00688 224 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 LRRC63Q05C16 580 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 PPP3CAQ08209 521 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 PLD1Q13393 1074 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 ZNF699Q32M78 642 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 MGAT5BQ3V5L5 792 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 INTS6LQ5JSJ4 861 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 RSAD2Q8WXG1 361 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 EDAQ92838 391 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 TCEAL4Q96EI5 215 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 PKMYT1Q99640 499 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 MKNK1Q9BUB5 465 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 DNAJC25Q9H1X3 360 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 SMOC2Q9H3U7 446 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 MMRN2Q9H8L6 949 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 KCNK12Q9HB15 430 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.24■□□□□ 0.673e-8■■■■■ 45.9
SNRPA1-201ENST00000254193 LMBRD1Q9NUN5 540 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 GTF3C4Q9UKN8 822 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 PCDHB5Q9Y5E4 795 aa19.24■□□□□ 0.67
SNRPA1-201ENST00000254193 MYBPHLA2RUH7 354 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 TACC1O75410 805 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 HLA-DRAP01903 254 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 GNL1P36915 607 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 CCR2P41597 374 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 TUFMP49411 452 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 PSMC1P62191 440 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 SMARCB1Q12824 385 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 NFE2Q16621 373 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 NPAS3Q8IXF0 933 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 ZC3H3Q8IXZ2 948 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 SPPL2BQ8TCT7 592 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 C2orf15Q8WU43 125 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 NELFBQ8WX92 580 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 SYT15Q9BQS2 421 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 PI4K2AQ9BTU6 479 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 SNX25Q9H3E2 840 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 VRTNQ9H8Y1 702 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 AVENQ9NQS1 362 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 KIAA1468Q9P260 1216 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 HSFX1Q9UBD0 423 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 SORCS3Q9UPU3 1222 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 NME7Q9Y5B8 376 aa19.23■□□□□ 0.67
SNRPA1-201ENST00000254193 NRG2O14511 850 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 HAPLN1P10915 354 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 MYL4P12829 197 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CEBPBP17676 345 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 PPP1R2P41236 205 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CDH8P55286 799 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 ENPEPQ07075 957 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 SGSM1Q2NKQ1 1148 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 ZNF667Q5HYK9 610 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 PRSS36Q5K4E3 855 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CYP4A22Q5TCH4 519 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 POTEHQ6S545 545 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 SCARA5Q6ZMJ2 495 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 PDZD4Q76G19 769 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 OR6B3Q8NGW1 331 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 TAS1R2Q8TE23 839 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 GBP4Q96PP9 640 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 DUSP9Q99956 384 aaKnown RBP19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 LPIN3Q9BQK8 851 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CLSTN2Q9H4D0 955 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 SMYD3Q9H7B4 428 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CRTAC1Q9NQ79 661 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 ASAH2Q9NR71 780 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CDH9Q9ULB4 789 aa19.22■□□□□ 0.67
SNRPA1-201ENST00000254193 CTNND2Q9UQB3 1225 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms