RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 SEMA3EO15041 775 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 IDH3BO43837 385 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 PCDH8O95206 1070 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 PARNO95453 639 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 ADD1P35611 737 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 PKN2Q16513 984 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 CCDC54Q8NEL0 328 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 PIGOQ8TEQ8 1089 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 CASP10Q92851 521 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 QKIQ96PU8 341 aaKnown RBP eCLIP10.7□□□□□ -0.71e-7■■■■■ 66.4
SLF2-201ENST00000238961 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 TRIM10Q9UDY6 481 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 CDC42BPAQ5VT25 1732 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 MEI4A8MW99 385 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 EIF4A2Q14240 407 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 TERF2Q15554 542 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 PTPN21Q16825 1174 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 CHPFQ8IZ52 775 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 GPD1LQ8N335 351 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 TRPC4APQ8TEL6 797 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 UBASH3BQ8TF42 649 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 PIGSQ96S52 555 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 C2orf40Q9H1Z8 148 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 TNPO2O14787 897 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 VPS4BO75351 444 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 OR6B1O95007 311 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 PRKAA1Q13131 559 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 CACHD1Q5VU97 1274 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 NLGN1Q8N2Q7 840 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 REXO5Q96IC2 774 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 KIAA1586Q9HCI6 787 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 MGAT4DA6NG13 374 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 GPC5P78333 572 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 DGKDQ16760 1214 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 OR6J1Q8NGC5 347 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 ATL2Q8NHH9 583 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 USP7Q93009 1102 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 CMTM5Q96DZ9 223 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 DSCC1Q9BVC3 393 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 GNG14A0A1W2PPG7 69 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 SPTLC1O15269 473 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 CNOT3O75175 753 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 RCVRNP35243 200 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 NDUFA8P51970 172 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 NPEPPSP55786 919 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 UGT3A1Q6NUS8 523 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 TTC33Q6PID6 262 aaPredicted RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 TRIM72Q6ZMU5 477 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 SLC7A14Q8TBB6 771 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 HOXC10Q9NYD6 342 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 MGAT4AQ9UM21 535 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 MORC2Q9Y6X9 1032 aaPredicted RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 ZNF804BA4D1E1 1349 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 OR1G1P47890 313 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 MAGOHP61326 146 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.7□□□□□ -0.7
SLF2-201ENST00000238961 ZNF658Q5TYW1 1059 aaPredicted RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 RGL4Q8IZJ4 473 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 MRPL4Q9BYD3 311 aaKnown RBP10.7□□□□□ -0.7
SLF2-201ENST00000238961 KLHL28Q9NXS3 571 aa10.7□□□□□ -0.7
SLF2-201ENST00000238961 MED23Q9ULK4 1368 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 MGRN1O60291 552 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 TBXAS1P24557 533 aaPredicted RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 IL12RB1P42701 662 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 PDX1P52945 283 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 EIF3EP60228 445 aaKnown RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 ACTN3Q08043 901 aaPredicted RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 GRSF1Q12849 480 aaKnown RBP eCLIP10.69□□□□□ -0.7
SLF2-201ENST00000238961 HPS6Q86YV9 775 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 RDM1Q8NG50 284 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 ZNF671Q8TAW3 534 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 UBE2OQ9C0C9 1292 aaKnown RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 DCTPP1Q9H773 170 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 ASXL1Q8IXJ9 1541 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 TIMM44O43615 452 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 KPNA6O60684 536 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 HIST1H2ABP04908 130 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 PAICSP22234 425 aaKnown RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 S100A1P23297 94 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 CBX5P45973 191 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 TTLL9Q3SXZ7 439 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 HIST3H2AQ7L7L0 130 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 HIST1H2ACQ93077 130 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 CYP2D7A0A087X1C5 515 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 CYP27B1O15528 508 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 GCP02774 474 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 FCER1AP12319 257 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 KCNB1Q14721 858 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 POLD3Q15054 466 aaPredicted RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 CINPQ9BW66 212 aaPredicted RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 CLIC4Q9Y696 253 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 LCA5LO95447 670 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 SARSP49591 514 aaKnown RBP10.69□□□□□ -0.7
SLF2-201ENST00000238961 CEBPGP53567 150 aa10.69□□□□□ -0.7
SLF2-201ENST00000238961 NLRP11P59045 1033 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms