RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 ELOVL4Q9GZR5 314 aa20.36■□□□□ 0.85
UBE2E3-209ENST00000602710 KCNF1Q9H3M0 494 aa20.36■□□□□ 0.85
UBE2E3-209ENST00000602710 ZNHIT6Q9NWK9 470 aaKnown RBP20.36■□□□□ 0.85
UBE2E3-209ENST00000602710 BARX2Q9UMQ3 279 aaPredicted RBP20.36■□□□□ 0.85
UBE2E3-209ENST00000602710 LINC00271P0C7V0 271 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 MYOGP15173 224 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 LAG3P18627 525 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 LMO2P25791 158 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 ZNF132P52740 706 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 RAD23BP54727 409 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 SP7Q8TDD2 431 aaPredicted RBP20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 BAG1Q99933 345 aaPredicted RBP20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 ARHGAP20Q9P2F6 1191 aa20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 TNRC18O15417 2968 aaPredicted RBP20.35■□□□□ 0.85
UBE2E3-209ENST00000602710 PDGFRBP09619 1106 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 ODC1P11926 461 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 FECHP22830 423 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 WARSP23381 471 aaKnown RBP20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 GNL1P36915 607 aaPredicted RBP20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 KLHL30Q0D2K2 578 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 FUT10Q6P4F1 479 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 SLC39A11Q8N1S5 342 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 IGSF21Q96ID5 467 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 B3GALT6Q96L58 329 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 SNX25Q9H3E2 840 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 HAUS4Q9H6D7 363 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 PCDHB8Q9UN66 801 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 TSC2P49815 1807 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 GBF1Q92538 1859 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 LAMA2P24043 3122 aaKnown RBP20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 VWA8A3KMH1 1905 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 GABRDO14764 452 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 TRAPPC3O43617 180 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 CYP11A1P05108 521 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 SERPING1P05155 500 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 TKTP29401 623 aaKnown RBP20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 PRKCIP41743 596 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 CCZ1BP86790 482 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 CCZ1P86791 482 aaPredicted RBP20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 FAM171A1Q5VUB5 890 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 TAS1R1Q7RTX1 841 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 TMEM86AQ8N2M4 240 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 SLC4A11Q8NBS3 891 aa20.34■□□□□ 0.85
UBE2E3-209ENST00000602710 A8MXQ7 604 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 FAM163BP0C2L3 166 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 CYP11B1P15538 503 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 PTK2Q05397 1052 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 TDRD12Q587J7 1177 aaKnown RBP20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 ZNF571Q7Z3V5 609 aaPredicted RBP20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 NOP9Q86U38 636 aaKnown RBP20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 TTC39CQ8N584 583 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 SLC20A1Q8WUM9 679 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 CLP1Q92989 425 aaKnown RBP20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 TMEM176AQ96HP8 235 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 LPIN3Q9BQK8 851 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 VN1R3Q9BXE9 311 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 NT5C1AQ9BXI3 368 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 DPEP3Q9H4B8 488 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 FAM124BQ9H5Z6 455 aaPredicted RBP20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 DDX43Q9NXZ2 648 aaKnown RBP20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 STXBP5LQ9Y2K9 1186 aa20.33■□□□□ 0.84
UBE2E3-209ENST00000602710 SF3B1O75533 1304 aaKnown RBP eCLIP20.32■□□□□ 0.843e-6■■■■■ 36
UBE2E3-209ENST00000602710 SOWAHDA6NJG2 315 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 ARHGEF15O94989 841 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 EFEMP2O95967 443 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 CCDC172P0C7W6 258 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 ACAT1P24752 427 aaKnown RBP20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 EIF4A3P38919 411 aaKnown RBP20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 CDK17Q00537 523 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 CYP26C1Q6V0L0 522 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 ACOT1Q86TX2 421 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 UNC93AQ86WB7 457 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 METTL23Q86XA0 190 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 CEP57Q86XR8 500 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 FMNL3Q8IVF7 1028 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 EPS8L1Q8TE68 723 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 RTP3Q9BQQ7 232 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 ZSWIM1Q9BR11 485 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 SPG21Q9NZD8 308 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 PUF60Q9UHX1 559 aaKnown RBP20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 NOCTQ9UK39 431 aaKnown RBP20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 DSEQ9UL01 958 aa20.32■□□□□ 0.84
UBE2E3-209ENST00000602710 ATP2C2O75185 946 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 TYMPP19971 482 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 GNA15P30679 374 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 SSTR3P32745 418 aaPredicted RBP20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 LHX1P48742 406 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 MTF1Q14872 753 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 KIAA0319Q5VV43 1072 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 TAF3Q5VWG9 929 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 OVOS1Q6IE37 1185 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 SPRED2Q7Z698 418 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 TMTC1Q8IUR5 882 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 TFAP2BQ92481 460 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 DDX1Q92499 740 aaKnown RBP20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 HEXIM2Q96MH2 286 aaKnown RBP20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 NHEJ1Q9H9Q4 299 aaPredicted RBP20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 AAASQ9NRG9 546 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 PCDHB12Q9Y5F1 795 aa20.31■□□□□ 0.84
UBE2E3-209ENST00000602710 ARHGEF37A1IGU5 675 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms