RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 POMKQ9H5K3 350 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.55■■□□□ 1.04
SSBP4-210ENST00000601444 POLIQ9UNA4 740 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 FAM50BQ9Y247 325 aa21.55■■□□□ 1.04
SSBP4-210ENST00000601444 SLC16A3O15427 465 aaKnown RBP21.54■■□□□ 1.04
SSBP4-210ENST00000601444 CCL16O15467 120 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 LRRN2O75325 713 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 DPCR1Q3MIW9 517 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 WDR72Q3MJ13 1102 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 PPM1LQ5SGD2 360 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 ATAT1Q5SQI0 421 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 LIN9Q5TKA1 542 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 TPGS2Q68CL5 300 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 ELMSAN1Q6PJG2 1045 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 LRRTM3Q86VH5 581 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 ADGRF2Q8IZF7 708 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 THEM5Q8N1Q8 247 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 TOP6BLQ8N6T0 577 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 CMASQ8NFW8 434 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-210ENST00000601444 KBTBD7Q8WVZ9 684 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 MMS19Q96T76 1030 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 OXCT2Q9BYC2 517 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-210ENST00000601444 PRKD2Q9BZL6 878 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 ZCWPW1Q9H0M4 648 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 CRISPLD1Q9H336 500 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 CYP4F11Q9HBI6 524 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 CD320Q9NPF0 282 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 ZDHHC7Q9NXF8 308 aa21.54■■□□□ 1.04
SSBP4-210ENST00000601444 NXF1Q9UBU9 619 aaKnown RBP21.54■■□□□ 1.04
SSBP4-210ENST00000601444 BICDL2A1A5D9 508 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 HLA-DRAP01903 254 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 SP100P23497 879 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 ACAT1P24752 427 aaKnown RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 ENPEPQ07075 957 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 GPR17Q13304 367 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 FILIP1Q7Z7B0 1213 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 TAS1R2Q8TE23 839 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 SMG7Q92540 1137 aaKnown RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 SYAP1Q96A49 352 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 RIPOR3Q96MK2 946 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 MRPL45Q9BRJ2 306 aaKnown RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 PI4K2AQ9BTU6 479 aa21.53■■□□□ 1.04
SSBP4-210ENST00000601444 DDX43Q9NXZ2 648 aaKnown RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 AFF4Q9UHB7 1163 aaKnown RBP21.53■■□□□ 1.04
SSBP4-210ENST00000601444 PRRG1O14668 218 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 GABRDO14764 452 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 PAPLNO95428 1278 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 STAU1O95793 577 aaKnown RBP21.52■■□□□ 1.04
SSBP4-210ENST00000601444 LMO2P25791 158 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ATICP31939 592 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ELF1P32519 619 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 MTHFRP42898 656 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 NLRP12P59046 1061 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ZP2Q05996 745 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 CCDC142Q17RM4 750 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 UVSSAQ2YD98 709 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ZNF699Q32M78 642 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 SLC39A12Q504Y0 691 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 DCAF17Q5H9S7 520 aaPredicted RBP21.52■■□□□ 1.04
SSBP4-210ENST00000601444 SPOPLQ6IQ16 392 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 FOXR2Q6PJQ5 311 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 DPH6Q7L8W6 267 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ADHFE1Q8IWW8 467 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 TCEAL8Q8IYN2 117 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 TMEM86AQ8N2M4 240 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 TTC9BQ8N6N2 239 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 MLKLQ8NB16 471 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ATAD1Q8NBU5 361 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 CEP63Q96MT8 703 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 SRRTQ9BXP5 876 aaKnown RBP21.52■■□□□ 1.04
SSBP4-210ENST00000601444 TMEM8AQ9HCN3 771 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 TMLHEQ9NVH6 421 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 ARMCX3Q9UH62 379 aaPredicted RBP21.52■■□□□ 1.04
SSBP4-210ENST00000601444 RWDD2AQ9UIY3 292 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 SLC27A5Q9Y2P5 690 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 NME7Q9Y5B8 376 aa21.52■■□□□ 1.04
SSBP4-210ENST00000601444 MTCL1Q9Y4B5 1905 aaKnown RBP21.51■■□□□ 1.03
SSBP4-210ENST00000601444 MTMR11A4FU01 709 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 MBD3O95983 291 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 PIK3CAP42336 1068 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 CDH8P55286 799 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 TNNC1P63316 161 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 DUSP4Q13115 394 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 TCERG1LQ5VWI1 586 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 RBM43Q6ZSC3 357 aaKnown RBP21.51■■□□□ 1.03
SSBP4-210ENST00000601444 CCDC149Q6ZUS6 474 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 RPGRIP1Q96KN7 1286 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 PHF7Q9BWX1 381 aaPredicted RBP21.51■■□□□ 1.03
SSBP4-210ENST00000601444 VRTNQ9H8Y1 702 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 PIDD1Q9HB75 910 aa21.51■■□□□ 1.03
SSBP4-210ENST00000601444 ATP2C2O75185 946 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 SOAT2O75908 522 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 CLSTN1O94985 981 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 PDGFRBP09619 1106 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 HNRNPA1P09651 372 aaKnown RBP eCLIP21.5■■□□□ 1.03
SSBP4-210ENST00000601444 RAP1GAPP47736 663 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 LHX1P48742 406 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 NTHL1P78549 312 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 SGSM1Q2NKQ1 1148 aa21.5■■□□□ 1.03
SSBP4-210ENST00000601444 CCDC40Q4G0X9 1142 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms