RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ELMOD1Q8N336 334 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 PDCL2Q8N4E4 241 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 PLEKHO2Q8TD55 490 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 ZNF707Q96C28 371 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 ACSF2Q96CM8 615 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 FAM84AQ96KN4 292 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 CLSTN2Q9H4D0 955 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 WDR6Q9NNW5 1121 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 L1RE1Q9UN81 338 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 USTQ9Y2C2 406 aa18.56■□□□□ 0.56
SHKBP1-212ENST00000596163 SLC16A3O15427 465 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 GTF2H1P32780 548 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 TNNC1P63316 161 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 PLD1Q13393 1074 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 RNF19BQ6ZMZ0 732 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 OTOP3Q7RTS5 596 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 ADGRF2Q8IZF7 708 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 PLCD3Q8N3E9 789 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 C2orf15Q8WU43 125 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 MMS19Q96T76 1030 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 ACBD6Q9BR61 282 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 ZCWPW1Q9H0M4 648 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 HSFX1Q9UBD0 423 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 POLIQ9UNA4 740 aa18.55■□□□□ 0.56
SHKBP1-212ENST00000596163 ANK1P16157 1881 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 XIRP2A4UGR9 3374 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 PPP1R3GB7ZBB8 358 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 CCL16O15467 120 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 CLSTN1O94985 981 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 P4HA1P13674 534 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 PCSK1P29120 753 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 DLG4P78352 724 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 NCOA4Q13772 614 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 SGSM1Q2NKQ1 1148 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 WDR72Q3MJ13 1102 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 ZACNQ401N2 412 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 TDRD10Q5VZ19 366 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 SV2AQ7L0J3 742 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 TDRD5Q8NAT2 981 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 NELFBQ8WX92 580 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 TAF4BQ92750 862 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 CEP63Q96MT8 703 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 NUP62CLQ9H1M0 184 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 VRTNQ9H8Y1 702 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 DDX43Q9NXZ2 648 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 CDH22Q9UJ99 828 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 INSL5Q9Y5Q6 135 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 VWA8A3KMH1 1905 aa18.54■□□□□ 0.56
SHKBP1-212ENST00000596163 CLUHO75153 1309 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 SEC24AO95486 1093 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 OR4Q2P0C623 313 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 PTPN2P17706 415 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 ALDH1A3P47895 512 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 TUFMP49411 452 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 MCCD1P59942 119 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 MYL6P60660 151 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 NFE2Q16621 373 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 SOWAHAQ2M3V2 549 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 SLC39A12Q504Y0 691 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 ZNF667Q5HYK9 610 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 IQCEQ6IPM2 695 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 LIMS2Q7Z4I7 341 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 FILIP1Q7Z7B0 1213 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 CCDC150Q8NCX0 1101 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 OR10T2Q8NGX3 314 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 ZNF512Q96ME7 567 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 IMPG2Q9BZV3 1241 aa18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 METTL14Q9HCE5 456 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-212ENST00000596163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.53■□□□□ 0.561e-8■■■■■ 45.1
SHKBP1-212ENST00000596163 TCF20Q9UGU0 1960 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 MTMR11A4FU01 709 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 GABRDO14764 452 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 TACC1O75410 805 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 FGFR1OPO95684 399 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 BMP6P22004 513 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 WARSP23381 471 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 DUSP4Q13115 394 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 PAK1Q13153 545 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 ZNF699Q32M78 642 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 SCARA3Q6AZY7 606 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 GRASPQ7Z6J2 395 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 SPPL2BQ8TCT7 592 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 PGLYRP2Q96PD5 576 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 RTP3Q9BQQ7 232 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 SNX25Q9H3E2 840 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 TMEM8AQ9HCN3 771 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 CD320Q9NPF0 282 aa18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 ARMCX3Q9UH62 379 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-212ENST00000596163 TRIM49BA6NDI0 452 aa18.51■□□□□ 0.55
SHKBP1-212ENST00000596163 GNA14O95837 355 aa18.51■□□□□ 0.55
SHKBP1-212ENST00000596163 ALADP13716 330 aa18.51■□□□□ 0.55
SHKBP1-212ENST00000596163 FSHRP23945 695 aa18.51■□□□□ 0.55
SHKBP1-212ENST00000596163 GBP2P32456 591 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms