RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 CDH7Q9ULB5 785 aa11.05□□□□□ -0.64
PPP4R1-220ENST00000581835 TRAF3IP3Q9Y228 551 aa11.05□□□□□ -0.64
PPP4R1-220ENST00000581835 TMEM221A6NGB7 291 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 M0R296 226 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 KIF20AO95235 890 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 NR3C1P04150 777 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 RHOP08100 348 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 COL9A1P20849 921 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 CASP4P49662 377 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 PNOCQ13519 176 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 HFE2Q6ZVN8 426 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 BMP8AQ7Z5Y6 402 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 UBALD2Q8IYN6 164 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 TMEM86AQ8N2M4 240 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 GUF1Q8N442 669 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 TOP6BLQ8N6T0 577 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 PLEKHO2Q8TD55 490 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 PARD3BQ8TEW8 1205 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 FGF13Q92913 245 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 TIGD1Q96MW7 591 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 CORO1BQ9BR76 489 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 CEP72Q9P209 647 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 L1RE1Q9UN81 338 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 MAPK8IP1Q9UQF2 711 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 SLC27A5Q9Y2P5 690 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 YIPF1Q9Y548 306 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 SNX9Q9Y5X1 595 aa11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 ZFP37Q9Y6Q3 630 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-220ENST00000581835 WDFY4Q6ZS81 3184 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 ANHXE9PGG2 379 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 HUS1O60921 280 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 CLDN10P78369 228 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 MYO1EQ12965 1108 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 TDGQ13569 410 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 NFIL3Q16649 462 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 SOWAHAQ2M3V2 549 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 SLC39A12Q504Y0 691 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 PRSS36Q5K4E3 855 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 IQCEQ6IPM2 695 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 POTEHQ6S545 545 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 DPH6Q7L8W6 267 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 LIMS2Q7Z4I7 341 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 ELMOD1Q8N336 334 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 TTC9BQ8N6N2 239 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 SPATA18Q8TC71 538 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 NXPE3Q969Y0 559 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 ZNF512Q96ME7 567 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 GSDMAQ96QA5 445 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 ACBD6Q9BR61 282 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 DNAJC25Q9H1X3 360 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 HSFX1Q9UBD0 423 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 MRPS23Q9Y3D9 190 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 DENND4CQ5VZ89 1909 aa11.03□□□□□ -0.64
PPP4R1-220ENST00000581835 PTPRDP23468 1912 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 NRG2O14511 850 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 ZNF197O14709 1029 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 GABRDO14764 452 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 GADD45BO75293 160 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 SOAT2O75908 522 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 C4BPAP04003 597 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 CCR2P41597 374 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 LHX1P48742 406 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 TUFMP49411 452 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 CDR1P51861 262 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 EPHB3P54753 998 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 EPHA5P54756 1037 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 DLG4P78352 724 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 MYL7Q01449 175 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 SMARCB1Q12824 385 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 PLD1Q13393 1074 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 HTR4Q13639 388 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 CYP4A22Q5TCH4 519 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 PARM1Q6UWI2 310 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 PDZD4Q76G19 769 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 OSTM1Q86WC4 334 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 SMYD4Q8IYR2 804 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 ADGRF2Q8IZF7 708 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 ST13P5Q8NFI4 369 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 C2orf15Q8WU43 125 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 ING5Q8WYH8 240 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 ERCC4Q92889 916 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 FGF14Q92915 247 aa11.02□□□□□ -0.65
PPP4R1-220ENST00000581835 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms