RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	PBXIP1	Q96AQ6	731 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	FNBP1	Q96RU3	617 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TMEM209	Q96SK2	561 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CGRRF1	Q99675	332 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	RTP3	Q9BQQ7	232 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CORO1B	Q9BR76	489 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ZCWPW1	Q9H0M4	648 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CRISPLD1	Q9H336	500 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	NUMBL	Q9Y6R0	609 aa		11.77	□□□□□ -0.53
PPP4R1-208	ENST00000578178	EXOC3	O60645	756 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	HUS1	O60921	280 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PRPF40A	O75400	957 aa	Known RBP	11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	RHOBTB3	O94955	611 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ZNF202	O95125	648 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	DLAT	P10515	647 aa	Known RBP	11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CEBPB	P17676	345 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	MYO1E	Q12965	1108 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	DUSP4	Q13115	394 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PRSS36	Q5K4E3	855 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CENPP	Q6IPU0	288 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	MTSS1L	Q765P7	747 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PDCL2	Q8N4E4	241 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TTC9B	Q8N6N2	239 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	RDH13	Q8NBN7	331 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	LEMD2	Q8NC56	503 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SPATA18	Q8TC71	538 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	KCTD10	Q9H3F6	313 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ASAH2	Q9NR71	780 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	GDAP2	Q9NXN4	497 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CEP72	Q9P209	647 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	HSFX1	Q9UBD0	423 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	L1RE1	Q9UN81	338 aa		11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.76	□□□□□ -0.53
PPP4R1-208	ENST00000578178	GOLGA6L4	A6NEF3	574 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PDXK	O00764	312 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ZNF197	O14709	1029 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	NARS	O43776	548 aa	Known RBP	11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	KIF20A	O95235	890 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PDGFB	P01127	241 aa	Predicted RBP	11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	NR3C1	P04150	777 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SRF	P11831	508 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TNNI1	P19237	187 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	EPHB3	P54753	998 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	EPHA5	P54756	1037 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	MYL7	Q01449	175 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TSPY1	Q01534	308 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SMARCB1	Q12824	385 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	KCNB1	Q14721	858 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SLC39A12	Q504Y0	691 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CYP4A22	Q5TCH4	519 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SCARA3	Q6AZY7	606 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PARM1	Q6UWI2	310 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TRAPPC11	Q7Z392	1133 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SLC9A9	Q8IVB4	645 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	DCP1B	Q8IZD4	617 aa	Known RBP	11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ADGRF2	Q8IZF7	708 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TMEM86A	Q8N2M4	240 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SLC44A3	Q8N4M1	653 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TOP6BL	Q8N6T0	577 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ATAD1	Q8NBU5	361 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SPPL2B	Q8TCT7	592 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	C2orf15	Q8WU43	125 aa	Known RBP	11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TMEM174	Q8WUU8	243 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	FGF14	Q92915	247 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CCDC127	Q96BQ5	260 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	HPDL	Q96IR7	371 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ZNF512	Q96ME7	567 aa	Predicted RBP	11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	DNAJC25	Q9H1X3	360 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	GDE1	Q9NZC3	331 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SNX9	Q9Y5X1	595 aa		11.75	□□□□□ -0.53
PPP4R1-208	ENST00000578178	MICAL2	O94851	1124 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CCR2	P41597	374 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ALDH1A3	P47895	512 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TUFM	P49411	452 aa	Known RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TMC8	Q8IU68	726 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	HS6ST3	Q8IZP7	471 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	TCEAL4	Q96EI5	215 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SEPT5	Q99719	369 aa	Predicted RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	GZF1	Q9H116	711 aa	Predicted RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	KCNH6	Q9H252	994 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	MFSD1	Q9H3U5	465 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	DMAC2	Q9NW81	257 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	DDX43	Q9NXZ2	648 aa	Known RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ABI2	Q9NYB9	513 aa	Predicted RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	FBXL21	Q9UKT6	434 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SLC27A5	Q9Y2P5	690 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ASB3	Q9Y575	518 aa		11.74	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CALU	O43852	315 aa	Predicted RBP	11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	SOAT2	O75908	522 aa		11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	CFH	P08603	1231 aa		11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	MYL4	P12829	197 aa		11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	ATF6	P18850	670 aa		11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	PCSK1	P29120	753 aa		11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	LHX1	P48742	406 aa		11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	VCP	P55072	806 aa	Known RBP	11.73	□□□□□ -0.53
PPP4R1-208	ENST00000578178	FAM160A1	Q05DH4	1040 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms