RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 UGCGQ16739 394 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 DCAF12L1Q5VU92 463 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 LRIG3Q6UXM1 1119 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 PDZD3Q86UT5 571 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 CD302Q8IX05 232 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 RASGEF1CQ8N431 466 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 MYCBPAPQ8TBZ2 947 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 ZNF564Q8TBZ8 553 aaPredicted RBP5.71□□□□□ -1.49
VAPA-203ENST00000577539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.71□□□□□ -1.49
VAPA-203ENST00000577539 CABS1Q96KC9 395 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 IWS1Q96ST2 819 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 NRSN2Q9GZP1 204 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 AGO4Q9HCK5 861 aaKnown RBP5.71□□□□□ -1.49
VAPA-203ENST00000577539 ENAMQ9NRM1 1142 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 ASIC3Q9UHC3 531 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 GOLGB1Q14789 3259 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 ANKRD63C9JTQ0 380 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 RGS16O15492 202 aaPredicted RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 ZBED4O75132 1171 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 RTN2O75298 545 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 FAM163BP0C2L3 166 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 ECHS1P30084 290 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 SOX18P35713 384 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 IFNAR2P48551 515 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PTENP60484 403 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CALCOCO2Q13137 446 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PPP2R5EQ16537 467 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CCDC137Q6PK04 289 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 RNF207Q6ZRF8 634 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CCDC121Q6ZUS5 278 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 HOOK3Q86VS8 718 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CCDC50Q8IVM0 306 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 SYTL5Q8TDW5 730 aaPredicted RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 TAS1R2Q8TE23 839 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 C1orf54Q8WWF1 131 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 DEPDC7Q96QD5 511 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PCDHB18PQ96TA0 734 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 GPR88Q9GZN0 384 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 TAOK3Q9H2K8 898 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 STK32BQ9NY57 414 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 SIRPGQ9P1W8 387 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CNOT8Q9UFF9 292 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 DNMT3LQ9UJW3 386 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 GMNCA6NCL1 334 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 MIF4GDA9UHW6 222 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 WDR64B1ANS9 1081 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PLSCR1O15162 318 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CTNND1O60716 968 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 CAND2O75155 1236 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 STK10O94804 968 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 TNNI1P19237 187 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 FGFR4P22455 802 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CNGA1P29973 690 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 MNAT1P51948 309 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PMS2P54278 862 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PSMC5P62195 406 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 MRPS9P82933 396 aaKnown RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 SPP2Q13103 211 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 ALCAMQ13740 583 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 KIF22Q14807 665 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 KRT39Q6A163 491 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PCGF5Q86SE9 256 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 SDR16C5Q8N3Y7 309 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PLEKHO2Q8TD55 490 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 DYDC1Q8WWB3 177 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 KIFAP3Q92845 792 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 CCDC114Q96M63 670 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 SLC30A3Q99726 388 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 FAM213AQ9BRX8 229 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 OXCT2Q9BYC2 517 aaPredicted RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 TBC1D22BQ9NU19 505 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 POLR3KQ9Y2Y1 108 aaPredicted RBP5.71□□□□□ -1.5
VAPA-203ENST00000577539 NCANO14594 1321 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 SYNGAP1Q96PV0 1343 aa5.71□□□□□ -1.5
VAPA-203ENST00000577539 PHF20L1A8MW92 1017 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CLDN3O15551 220 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 MEFVO15553 781 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 PHF2O75151 1096 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CILPO75339 1184 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 SHBGP04278 402 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PYGMP11217 842 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 MUTP22033 750 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 NPTX2P47972 431 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 BAATQ14032 418 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 SLC29A2Q14542 456 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 ILDR2Q71H61 639 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 MGARPQ8TDB4 240 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 SEMA4DQ92854 862 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 FNBP1Q96RU3 617 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 ZSWIM1Q9BR11 485 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 AZI2Q9H6S1 392 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 AVENQ9NQS1 362 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 GEMIN8Q9NWZ8 242 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 MAP3K20Q9NYL2 800 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 ANAPC7Q9UJX3 599 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 DIS3Q9Y2L1 958 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 UBR3Q6ZT12 1888 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 C10orf71Q711Q0 1435 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 THSD7AQ9UPZ6 1657 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms