RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	NIFK	Q9BYG3	293 aa	Known RBP	12.7	□□□□□ -0.38
SPG7-222	ENST00000569820	DHX33	Q9H6R0	707 aa	Known RBP	12.7	□□□□□ -0.38
SPG7-222	ENST00000569820	PIDD1	Q9HB75	910 aa		12.7	□□□□□ -0.38
SPG7-222	ENST00000569820	NENF	Q9UMX5	172 aa		12.7	□□□□□ -0.38
SPG7-222	ENST00000569820	EXOC7	Q9UPT5	735 aa		12.7	□□□□□ -0.38
SPG7-222	ENST00000569820	PDHX	O00330	501 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	MAPK13	O15264	365 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	DDX3Y	O15523	660 aa	Known RBP	12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	PEX11A	O75192	247 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	ADRB2	P07550	413 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	TPBGL	P0DKB5	382 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	CETP	P11597	493 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	TCF7	P36402	384 aa	Predicted RBP	12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	SCNN1B	P51168	640 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	POLG	P54098	1239 aa	Predicted RBP	12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	MYL7	Q01449	175 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	CCDC15	Q0P6D6	951 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	MKRN3	Q13064	507 aa	Known RBP	12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	CLUL1	Q15846	466 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	C1orf220	Q5T0J3	134 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	WDR78	Q5VTH9	848 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	RNF43	Q68DV7	783 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	TMEM154	Q6P9G4	183 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	GJB7	Q6PEY0	223 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	TAS1R3	Q7RTX0	852 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	ANKRD42	Q8N9B4	389 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	PLEKHO2	Q8TD55	490 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	C17orf50	Q8WW18	174 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	BRI3BP	Q8WY22	251 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	ARHGEF2	Q92974	986 aa	Known RBP	12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	ZWILCH	Q9H900	591 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	ARHGAP28	Q9P2N2	729 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	SLC45A1	Q9Y2W3	748 aa		12.69	□□□□□ -0.38
SPG7-222	ENST00000569820	CCL15-CCL14	A0A0B4J2E2	113 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	BTBD19	C9JJ37	291 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	MAP3K13	O43283	966 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	ACADS	P16219	412 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	RPL21	P46778	160 aa	Known RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	PEX5	P50542	639 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	TARBP2	Q15633	366 aa	Known RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	CCL15	Q16663	113 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	FBXO16	Q8IX29	292 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	U2AF1L4	Q8WU68	220 aa	Known RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	CKAP2	Q8WWK9	683 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	RUNDC3B	Q96NL0	473 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	RPS6KC1	Q96S38	1066 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	VCX	Q9H320	206 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	MLXIPL	Q9NP71	852 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	OSGEP	Q9NPF4	335 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	RARG	P13631	454 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	ATP5D	P30049	168 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	MAGEA10	P43363	369 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	VAMP7	P51809	220 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	GTF2A2	P52657	109 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	GALC	P54803	685 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	MCCD1	P59942	119 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	FKBP1B	P68106	108 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	MGAT5	Q09328	741 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	TMED1	Q13445	227 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	CCDC62	Q6P9F0	684 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.68	□□□□□ -0.38	5e-6	■■■■■ 81.8
SPG7-222	ENST00000569820	AGGF1	Q8N302	714 aa	eCLIP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	GDAP1	Q8TB36	358 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	SEPT1	Q8WYJ6	367 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	C18orf8	Q96DM3	657 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	TGS1	Q96RS0	853 aa	Known RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	NUDCD1	Q96RS6	583 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	INTS2	Q9H0H0	1204 aa	Known RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	LRMDA	Q9H2I8	198 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	GBA2	Q9HCG7	927 aa	Predicted RBP	12.68	□□□□□ -0.38
SPG7-222	ENST00000569820	KCNK9	Q9NPC2	374 aa		12.68	□□□□□ -0.38
SPG7-222	ENST00000569820		A0A1B0GVG6	124 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	DDX3X	O00571	662 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	ATP5H	O75947	161 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	SP100	P23497	879 aa	Predicted RBP	12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	STAT5B	P51692	787 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	PPP3CA	Q08209	521 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	ZNF211	Q13398	564 aa	Predicted RBP	12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	LONRF1	Q17RB8	773 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	HSDL1	Q3SXM5	330 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	CELF3	Q5SZQ8	465 aa	Known RBP	12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	FAM160B1	Q5W0V3	765 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	VSTM1	Q6UX27	236 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	ECHDC2	Q86YB7	292 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	CBWD2	Q8IUF1	395 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	GPRC5A	Q8NFJ5	357 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	LMO3	Q8TAP4	145 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	ASAP3	Q8TDY4	903 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	DNAJC9	Q8WXX5	260 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	RFFL	Q8WZ73	363 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	KCNN1	Q92952	543 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	TMEM143	Q96AN5	459 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	AGAP3	Q96P47	875 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	GPR20	Q99678	358 aa		12.67	□□□□□ -0.38
SPG7-222	ENST00000569820	CTNNAL1	Q9UBT7	734 aa		12.67	□□□□□ -0.38

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