RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ARHGAP29Q52LW3 1261 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 C10orf76Q5T2E6 689 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 C7orf61Q8IZ16 206 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 TOP6BLQ8N6T0 577 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 SLC4A11Q8NBS3 891 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 TMCO5BA8MYB1 307 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 CYB561D2O14569 222 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 TACC1O75410 805 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 ACRP10323 421 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 PAN2Q504Q3 1202 aaKnown RBP32.59■■■□□ 2.81
CTCF-203ENST00000566078 LIMS2Q7Z4I7 341 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 COLGALT2Q8IYK4 626 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 KBTBD7Q8WVZ9 684 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 TMEM176AQ96HP8 235 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 SENP8Q96LD8 212 aa32.59■■■□□ 2.81
CTCF-203ENST00000566078 COL4A6Q14031 1691 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 B3GAT3O94766 335 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 UPP2O95045 317 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 CD19P15391 556 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 ARHGAP25P42331 645 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 DSTYKQ6XUX3 929 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 DNAAF5Q86Y56 855 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 ADGRF2Q8IZF7 708 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 TXLNBQ8N3L3 684 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 OR6B3Q8NGW1 331 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 ZNF606Q8WXB4 792 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 C16orf45Q96MC5 204 aaPredicted RBP32.58■■■□□ 2.81
CTCF-203ENST00000566078 NT5C1AQ9BXI3 368 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 PACSIN1Q9BY11 444 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 PDCL3Q9H2J4 239 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 IL23AQ9NPF7 189 aa32.58■■■□□ 2.81
CTCF-203ENST00000566078 MYH10P35580 1976 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 TBKBP1A7MCY6 615 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 SSTR3P32745 418 aaPredicted RBP32.57■■■□□ 2.8
CTCF-203ENST00000566078 DPH6Q7L8W6 267 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 PDCL2Q8N4E4 241 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 HASPINQ8TF76 798 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 MRPL9Q9BYD2 267 aaKnown RBP32.57■■■□□ 2.8
CTCF-203ENST00000566078 LACRTQ9GZZ8 138 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 TAS2R14Q9NYV8 317 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 TRIM10Q9UDY6 481 aa32.57■■■□□ 2.8
CTCF-203ENST00000566078 FAM170AA1A519 330 aa32.56■■■□□ 2.8
CTCF-203ENST00000566078 ABL1P00519 1130 aa32.56■■■□□ 2.8
CTCF-203ENST00000566078 AARSP49588 968 aaKnown RBP eCLIP32.56■■■□□ 2.8
CTCF-203ENST00000566078 DCLRE1AQ6PJP8 1040 aa32.56■■■□□ 2.8
CTCF-203ENST00000566078 SNX25Q9H3E2 840 aa32.56■■■□□ 2.8
CTCF-203ENST00000566078 RRAGDQ9NQL2 400 aaPredicted RBP32.56■■■□□ 2.8
CTCF-203ENST00000566078 DNAJB4Q9UDY4 337 aa32.56■■■□□ 2.8
CTCF-203ENST00000566078 NME7Q9Y5B8 376 aa32.56■■■□□ 2.8
CTCF-203ENST00000566078 KIF4AO95239 1232 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 AMHP03971 560 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 OR1G1P47890 313 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 KIF5AQ12840 1032 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 CD300LGQ6UXG3 332 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 ZNF662Q6ZS27 426 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 UNC93AQ86WB7 457 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 RSPH1Q8WYR4 309 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 TFAP2BQ92481 460 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 ZSWIM1Q9BR11 485 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 TSGA10Q9BZW7 698 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 PJA2O43164 708 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 EFCAB14O75071 495 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 CFHP08603 1231 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 WARSP23381 471 aaKnown RBP32.55■■■□□ 2.8
CTCF-203ENST00000566078 CLEC16AQ2KHT3 1053 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 TIGD5Q53EQ6 642 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 NRDE2Q9H7Z3 1164 aa32.55■■■□□ 2.8
CTCF-203ENST00000566078 ATP8B3O60423 1300 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 KIAA1671Q9BY89 1806 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 A8MXQ7 604 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 F8W810 466 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 KRT86O43790 486 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 PAX3P23760 479 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 BRCC3P46736 316 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 WDR5P61964 334 aaKnown RBP32.54■■■□□ 2.8
CTCF-203ENST00000566078 PPIGQ13427 754 aaKnown RBP eCLIP32.54■■■□□ 2.82e-6■■□□□ 14.2
CTCF-203ENST00000566078 PTPN14Q15678 1187 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 NYAP1Q6ZVC0 841 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 PASD1Q8IV76 773 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 BADQ92934 168 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 HEXIM2Q96MH2 286 aaKnown RBP32.54■■■□□ 2.8
CTCF-203ENST00000566078 VWA8A3KMH1 1905 aa32.54■■■□□ 2.8
CTCF-203ENST00000566078 I3L4J1 428 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 MED7O43513 233 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 BAIAP3O94812 1187 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 ITGB1P05556 798 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 H2AFZP0C0S5 128 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 GZMAP12544 262 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 GNL1P36915 607 aaPredicted RBP32.53■■■□□ 2.8
CTCF-203ENST00000566078 DEFB103AP81534 67 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 FPGSQ05932 587 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 WSCD1Q658N2 575 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 TRIM72Q6ZMU5 477 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 H2AFVQ71UI9 128 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 OSTM1Q86WC4 334 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 LRRC43Q8N309 656 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 GUCA1BQ9UMX6 200 aa32.53■■■□□ 2.8
CTCF-203ENST00000566078 HCRTO43612 131 aa32.52■■■□□ 2.8
CTCF-203ENST00000566078 RTN2O75298 545 aa32.52■■■□□ 2.8
CTCF-203ENST00000566078 VDRP11473 427 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms