RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ANGPT1Q15389 498 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 NFIL3Q16649 462 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
USB1-208ENST00000563207 FAM212AQ96EL1 285 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 DHTKD1Q96HY7 919 aaPredicted RBP16.92■□□□□ 0.3
USB1-208ENST00000563207 ZSWIM3Q96MP5 696 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 CORO1BQ9BR76 489 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 CRISPLD1Q9H336 500 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 RPF1Q9H9Y2 349 aaKnown RBP16.92■□□□□ 0.3
USB1-208ENST00000563207 SLC2A4RGQ9NR83 387 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 DLGAP2Q9P1A6 1054 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 TRAF3IP3Q9Y228 551 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 MRPS23Q9Y3D9 190 aaKnown RBP16.92■□□□□ 0.3
USB1-208ENST00000563207 WDR87Q6ZQQ6 2873 aa16.92■□□□□ 0.3
USB1-208ENST00000563207 SPTLC1O15269 473 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 EXTL3O43909 919 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 ADRB2P07550 413 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 POU2F2P09086 479 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 NBL1P41271 181 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 PRCPP42785 496 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 SKOR2Q2VWA4 1001 aaPredicted RBP16.91■□□□□ 0.3
USB1-208ENST00000563207 PRSS36Q5K4E3 855 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 CCDC183Q5T5S1 534 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 SCARA3Q6AZY7 606 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 TANGO2Q6ICL3 276 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 FOXR2Q6PJQ5 311 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 RBM43Q6ZSC3 357 aaKnown RBP16.91■□□□□ 0.3
USB1-208ENST00000563207 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 ADSSL1Q8N142 457 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 GPD1LQ8N335 351 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 ZSWIM2Q8NEG5 633 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 PGLYRP2Q96PD5 576 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 TMEM209Q96SK2 561 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 RTP3Q9BQQ7 232 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 CBWD1Q9BRT8 395 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 ASB7Q9H672 318 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 CEP72Q9P209 647 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 INSL5Q9Y5Q6 135 aa16.91■□□□□ 0.3
USB1-208ENST00000563207 ZFP37Q9Y6Q3 630 aaPredicted RBP16.91■□□□□ 0.3
USB1-208ENST00000563207 FRYLO94915 3013 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 PROB1E7EW31 1015 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 H7C4K7 107 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 M0QZQ0 153 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 PSMA7O14818 248 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 MOSPD3O75425 235 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 IL18RAPO95256 599 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 LRG1P02750 347 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 NFICP08651 508 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 PTPN2P17706 415 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
USB1-208ENST00000563207 LRPAP1P30533 357 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 ELF1P32519 619 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 ACOT2P49753 483 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 PPP2R3AQ06190 1150 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 ADCY1Q08828 1119 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 EDRF1Q3B7T1 1238 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 JADE1Q6IE81 842 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 CENPPQ6IPU0 288 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 XXYLT1Q8NBI6 393 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 FAM84AQ96KN4 292 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 HSPBP1Q9NZL4 362 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 MAPK8IP1Q9UQF2 711 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 TSC2P49815 1807 aa16.9■□□□□ 0.3
USB1-208ENST00000563207 SCN1AP35498 2009 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 ZNF233A6NK53 670 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 BIN1O00499 593 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
USB1-208ENST00000563207 RFX1P22670 979 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 FCARP24071 287 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 WNT7BP56706 349 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 TWF1Q12792 350 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 SURF1Q15526 300 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 ZNF280DQ6N043 979 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
USB1-208ENST00000563207 NT5DC4Q86YG4 428 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 GPIHBP1Q8IV16 184 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 SMYD4Q8IYR2 804 aaPredicted RBP16.89■□□□□ 0.29
USB1-208ENST00000563207 TTC9BQ8N6N2 239 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 MLKLQ8NB16 471 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 TSG101Q99816 390 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 FAM213AQ9BRX8 229 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 PCIF1Q9H4Z3 704 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 UBQLN1Q9UMX0 589 aaKnown RBP16.89■□□□□ 0.29
USB1-208ENST00000563207 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 DERAQ9Y315 318 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 SIT1Q9Y3P8 196 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 NCANO14594 1321 aa16.89■□□□□ 0.29
USB1-208ENST00000563207 MIA3Q5JRA6 1907 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 BICDL2A1A5D9 508 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 SHISA7A6NL88 538 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 CLIC2O15247 247 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 SOAT2O75908 522 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 CPB1P15086 417 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 BMP6P22004 513 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 CCNE1P24864 410 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms