RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 NXF1Q9UBU9 619 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 POLIQ9UNA4 740 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 COQ4Q9Y3A0 265 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 FAM163BP0C2L3 166 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 OR4Q2P0C623 313 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 SRGAP2BP0DMP2 458 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 CCDC192P0DO97 292 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 HOXB8P17481 243 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 FMO5P49326 533 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 MXI1P50539 228 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 TNNC1P63316 161 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 KCNH2Q12809 1159 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 GPR17Q13304 367 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 CLUL1Q15846 466 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 TPD52L1Q16890 204 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 ZNF699Q32M78 642 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 ZNF667Q5HYK9 610 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 RNF19BQ6ZMZ0 732 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 LRRTM3Q86VH5 581 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 ADGRF2Q8IZF7 708 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 FBXL13Q8NEE6 735 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 FEZF2Q8TBJ5 459 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 SPATA18Q8TC71 538 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 ATXN2LQ8WWM7 1075 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 CNOT6LQ96LI5 555 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 PLEKHA4Q9H4M7 779 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 APOBEC3GQ9HC16 384 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 MAN1C1Q9NR34 630 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 RAB20Q9NX57 234 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 CD207Q9UJ71 328 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
RABGGTA-218ENST00000560777 PLXNA3P51805 1871 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 SYCE3A1L190 88 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 PMM2O15305 246 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 HCRTO43612 131 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 TACC1O75410 805 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 SEC24AO95486 1093 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 VNN2O95498 520 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 ATF2P15336 505 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 WARSP23381 471 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 LMO2P25791 158 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 LHX1P48742 406 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 CDH8P55286 799 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 TPGS2Q68CL5 300 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 SMRP1Q8NCR6 262 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 ACBD6Q9BR61 282 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 MRPL45Q9BRJ2 306 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 APOL5Q9BWW9 433 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 ZCWPW1Q9H0M4 648 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 DZANK1Q9NVP4 752 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 DDX43Q9NXZ2 648 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 AFF4Q9UHB7 1163 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 DPP7Q9UHL4 492 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 NME7Q9Y5B8 376 aa12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-218ENST00000560777 CCDC195A0A1B0GUA6 201 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 GRXCR2A6NFK2 248 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 RFPL2O75678 378 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ZMYND10O75800 440 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 PAPLNO95428 1278 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 PDGFRBP09619 1106 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 CPB1P15086 417 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ACAT1P24752 427 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 GNL1P36915 607 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ASPAP45381 313 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 KCNQ1P51787 676 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 MYL7Q01449 175 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ADCY1Q08828 1119 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 AAK1Q2M2I8 961 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 UVSSAQ2YD98 709 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 RARS2Q5T160 578 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 TMC5Q6UXY8 1006 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 TATDN2Q93075 761 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 SDCBP2Q9H190 292 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 ADAM7Q9H2U9 754 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 SMYD3Q9H7B4 428 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 UNC80Q8N2C7 3258 aa12.79□□□□□ -0.36
RABGGTA-218ENST00000560777 TSC2P49815 1807 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms