RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 O00370 1275 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 EFEMP2O95967 443 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 CLTBP09497 229 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 WEE2P0C1S8 567 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 KRT5P13647 590 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 LHX1P48742 406 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 GPC5P78333 572 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 AMPD2Q01433 879 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 TAP1Q03518 808 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 ARID5AQ03989 594 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 PTP4A2Q12974 167 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 SCARA3Q6AZY7 606 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 PLEKHA7Q6IQ23 1121 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 C11orf63Q6NUN7 778 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 CNKSR3Q6P9H4 555 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 NPAS4Q8IUM7 802 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 RPUSD2Q8IZ73 545 aaKnown RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 SYCE1Q8N0S2 351 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 TMEM35BQ8NCS4 154 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 DBF4BQ8NFT6 615 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 CTNNBL1Q8WYA6 563 aaPredicted RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 C18orf25Q96B23 403 aaPredicted RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 TNIP3Q96KP6 325 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 SUSD3Q96L08 255 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 C16orf45Q96MC5 204 aaPredicted RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 TMEM175Q9BSA9 504 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 MRPL9Q9BYD2 267 aaKnown RBP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 CXCL16Q9H2A7 254 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 WDR35Q9P2L0 1181 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
PABPN1-203ENST00000553960 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
PABPN1-203ENST00000553960 TCRBV5S1A1TA0A578 114 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 CTAGE9A4FU28 777 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 SPTLC1O15269 473 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 FANCGO15287 622 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 HUS1O60921 280 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 BAIAP3O94812 1187 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 TIMP1P01033 207 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
PABPN1-203ENST00000553960 CALB1P05937 261 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 MMEP08473 750 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 KRT19P08727 400 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 GTF2F1P35269 517 aaKnown RBP eCLIP11.58□□□□□ -0.56
PABPN1-203ENST00000553960 MLH1P40692 756 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 SNX16P57768 344 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 GNG11P61952 73 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 NOMO2Q5JPE7 1267 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 CD300LGQ6UXG3 332 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 ZNF572Q7Z3I7 529 aaPredicted RBP11.58□□□□□ -0.56
PABPN1-203ENST00000553960 PALB2Q86YC2 1186 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 APPL2Q8NEU8 664 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 FNIP1Q8TF40 1166 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 FAM84AQ96KN4 292 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 ZFP42Q96MM3 310 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 ALS2CR12Q96Q35 445 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 WDR24Q96S15 920 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 ZSWIM1Q9BR11 485 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.58□□□□□ -0.56
PABPN1-203ENST00000553960 TMEM51Q9NW97 253 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 MIOSQ9NXC5 875 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 SALL4Q9UJQ4 1053 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 STRIP2Q9ULQ0 834 aa11.58□□□□□ -0.56
PABPN1-203ENST00000553960 FNDC1Q4ZHG4 1894 aaPredicted RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 MEIS3P2A8K0S8 358 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 PODXLO00592 558 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 SYN3O14994 580 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 KIF4AO95239 1232 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 ABL1P00519 1130 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 GPD2P43304 727 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 ZNF268Q14587 947 aaPredicted RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 TRIM60Q495X7 471 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 SGO2Q562F6 1265 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 CLLU1OSQ5K130 101 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 MFSD5Q6N075 450 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 ZDHHC17Q8IUH5 632 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 SCML4Q8N228 414 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 PIAS4Q8N2W9 510 aaPredicted RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 URGCPQ8TCY9 931 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 TFAP2BQ92481 460 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 HNRNPABQ99729 332 aaKnown RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 NAPGQ99747 312 aaPredicted RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 ELOVL4Q9GZR5 314 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 SMYD3Q9H7B4 428 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 MRPL47Q9HD33 250 aaKnown RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 LZTFL1Q9NQ48 299 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 NXF1Q9UBU9 619 aaKnown RBP11.57□□□□□ -0.56
PABPN1-203ENST00000553960 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 DNAI1Q9UI46 699 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 GUCA1BQ9UMX6 200 aa11.57□□□□□ -0.56
PABPN1-203ENST00000553960 L1RE1Q9UN81 338 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms