RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, human

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-218	ENST00000546298	GOLGA8J	A6NMD2	632 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	DPYSL4	O14531	572 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	MOSPD3	O75425	235 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	VNN2	O95498	520 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	F13A1	P00488	732 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	TMEM191B	P0C7N4	346 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	CCR2	P41597	374 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	ME1	P48163	572 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	CASP5	P51878	434 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	SNRPF	P62306	86 aa	Known RBP	10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	TSPY1	Q01534	308 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	E2F4	Q16254	413 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	NFE2	Q16621	373 aa	Predicted RBP	10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	MGAT5B	Q3V5L5	792 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	SLC39A12	Q504Y0	691 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	CNNM4	Q6P4Q7	775 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	ZC3H14	Q6PJT7	736 aa	Known RBP	10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	TPRG1	Q6ZUI0	275 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	FRMD5	Q7Z6J6	570 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	C1orf210	Q8IVY1	113 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	MFSD6L	Q8IWD5	586 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	YAF2	Q8IY57	180 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	EFCAB13	Q8IY85	973 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	TMEM86A	Q8N2M4	240 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	CSGALNACT2	Q8N6G5	542 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	OR10T2	Q8NGX3	314 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	SHKBP1	Q8TBC3	707 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	SPATA18	Q8TC71	538 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	SPPL2B	Q8TCT7	592 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	BORCS6	Q96GS4	357 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	GCNA	Q96QF7	691 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	SEPT5	Q99719	369 aa	Predicted RBP	10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	CBWD1	Q9BRT8	395 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	LRRC3	Q9BY71	257 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	PLA2G2F	Q9BZM2	168 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	FOXQ1	Q9C009	403 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	IKZF4	Q9H2S9	585 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	ATXN3L	Q9H3M9	355 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	PCIF1	Q9H4Z3	704 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	LTB4R2	Q9NPC1	389 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	TRPV5	Q9NQA5	729 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	DLGAP2	Q9P1A6	1054 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	ZMYM5	Q9UJ78	669 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	ITGA11	Q9UKX5	1188 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298	AGAP1	Q9UPQ3	857 aa		10.09	□□□□□ -0.79
YBX3-218	ENST00000546298		A0A1W2PRU2	124 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	ZNF263	O14978	683 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	EIF3D	O15371	548 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	LAMTOR5	O43504	91 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	TNNC2	P02585	160 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	KRT19	P08727	400 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	HAPLN1	P10915	354 aa	Predicted RBP	10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	GLUL	P15104	373 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	GJA1	P17302	382 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	FCAR	P24071	287 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	CDC25C	P30307	473 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	POLR2B	P30876	1174 aa	Known RBP	10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	GDI1	P31150	447 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	MYL7	Q01449	175 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	BFSP1	Q12934	665 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	MYO1E	Q12965	1108 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	GRM2	Q14416	872 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	FAM26F	Q5R3K3	315 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	C1orf228	Q6PIY5	440 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	SHC4	Q6S5L8	630 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	TMC8	Q8IU68	726 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	C1orf127	Q8N9H9	656 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	ANKRD36BP1	Q96IX9	119 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	ZSWIM3	Q96MP5	696 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	TMEM209	Q96SK2	561 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	C7orf25	Q9BPX7	421 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	ACBD6	Q9BR61	282 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	DNAJC25	Q9H1X3	360 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	CRISPLD1	Q9H336	500 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	PDE11A	Q9HCR9	933 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	HEBP1	Q9NRV9	189 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	GDAP2	Q9NXN4	497 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	OBP2A	Q9NY56	170 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	PCDHB5	Q9Y5E4	795 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	PLXNA3	P51805	1871 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	DENND4A	Q7Z401	1863 aa		10.08	□□□□□ -0.8
YBX3-218	ENST00000546298	PVALEF	A0A1B0GWK0	134 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	PRR23A	A6NEV1	266 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	HEPACAM2	A8MVW5	462 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	POLR2D	O15514	142 aa	Known RBP	10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	ABCB7	O75027	752 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	ITGB3	P05106	788 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	GABRR2	P28476	465 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	PCSK1	P29120	753 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	WEE1	P30291	646 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	VIPR2	P41587	438 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	RPS9	P46781	194 aa	Known RBP	10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	LHX1	P48742	406 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	MLLT6	P55198	1093 aa	Predicted RBP	10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	RPL10A	P62906	217 aa	Known RBP	10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	DUOXA2	Q1HG44	320 aa		10.07	□□□□□ -0.8
YBX3-218	ENST00000546298	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.07	□□□□□ -0.8

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