RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 ACRBPQ8NEB7 543 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 FBXO32Q969P5 355 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 SLC35C1Q96A29 364 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 SCLYQ96I15 445 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 NTPCRQ9BSD7 190 aaKnown RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 NUP85Q9BW27 656 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 ZNF518BQ9C0D4 1074 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 ELOVL4Q9GZR5 314 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 RAB17Q9H0T7 212 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 SEPT10Q9P0V9 454 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 UVRAGQ9P2Y5 699 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 MOCS2O96007 188 aaPredicted RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 SLC2A3P11169 496 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 ACO1P21399 889 aaKnown RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 MBTD1Q05BQ5 628 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 SPIRE1Q08AE8 756 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 KCNA1Q09470 495 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 UNC93AQ86WB7 457 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 RFFLQ8WZ73 363 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 EPAS1Q99814 870 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 NXF3Q9H4D5 531 aaKnown RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 SQORQ9Y6N5 450 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 ADGRA2Q96PE1 1338 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 ZNF189O75820 626 aaPredicted RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 ZRANB2O95218 330 aaKnown RBP eCLIP8.23□□□□□ -1.09
LRP6-206ENST00000543091 PDGFRAP16234 1089 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 BRD2P25440 801 aaKnown RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 NME3Q13232 169 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 PPM1LQ5SGD2 360 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 CES5AQ6NT32 575 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 CCDC25Q86WR0 208 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 NDUFAF2Q8N183 169 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 RNF10Q8N5U6 811 aaKnown RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 GAS2L1Q99501 681 aaPredicted RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 ZWILCHQ9H900 591 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.23□□□□□ -1.09
LRP6-206ENST00000543091 WBP1LQ9NX94 342 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 UXTQ9UBK9 157 aaPredicted RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 GJD2Q9UKL4 321 aa8.23□□□□□ -1.09
LRP6-206ENST00000543091 FARP1Q9Y4F1 1045 aaPredicted RBP8.23□□□□□ -1.09
LRP6-206ENST00000543091 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 LRRIQ3A6PVS8 624 aaPredicted RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 H3BRJ5 948 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 POU5F1Q01860 360 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 WHAMMP3Q1A5X7 153 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 FIGNQ5HY92 759 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 MDH1BQ5I0G3 518 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 CDKAL1Q5VV42 579 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 KLHL7Q8IXQ5 586 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 KRT222Q8N1A0 295 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 BSNDQ8WZ55 320 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 PBKQ96KB5 322 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 CDK5RAP1Q96SZ6 601 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 FZD8Q9H461 694 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 FBXO44Q9H4M3 255 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 RNF14Q9UBS8 474 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 TIMM13Q9Y5L4 95 aaPredicted RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 ASTN1O14525 1302 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 RAB30Q15771 203 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 SLC18A3Q16572 532 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 C10orf120Q5SQS8 335 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 TTC13Q8NBP0 860 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 FBXO22Q8NEZ5 403 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 C16orf70Q9BSU1 422 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 PDZD7Q9H5P4 517 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 JRKLQ9Y4A0 524 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 SCN9AQ15858 1988 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 PFDN6O15212 129 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 CKMP06732 381 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 NFICP08651 508 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 PAEPP09466 180 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 HARS2P49590 506 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 SULT1E1P49888 294 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 GFPT1Q06210 699 aaPredicted RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 BST2Q10589 180 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 MMS22LQ6ZRQ5 1243 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 EFCAB13Q8IY85 973 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 BBOF1Q8ND07 529 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 UBA3Q8TBC4 463 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 IFT81Q8WYA0 676 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 HSPH1Q92598 858 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 KRT82Q9NSB4 513 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 TMEM51Q9NW97 253 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 DDX56Q9NY93 547 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 OGFRQ9NZT2 677 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 FAM50BQ9Y247 325 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 NRXN2Q9P2S2 1712 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 OR6C75A6NL08 312 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 TISP43B9A030 160 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 B4GALT4O60513 344 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 RGS20O76081 388 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 LSM8O95777 96 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 RAD51Q06609 339 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 NR1H3Q13133 447 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 BIRC2Q13490 618 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 SLC39A5Q6ZMH5 540 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 SERINC5Q86VE9 423 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms