RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ANAPC2Q9UJX6 822 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CNOT11Q9UKZ1 510 aaKnown RBP2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CDH7Q9ULB5 785 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 SLC8A2Q9UPR5 921 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 PLAAQ9Y263 795 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 IRAK3Q9Y616 596 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 CAPN6Q9Y6Q1 641 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 MYH7BA7E2Y1 1941 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 MYH13Q9UKX3 1938 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 NRCAMQ92823 1304 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 AKAP9Q99996 3911 aa2.61□□□□□ -1.99
TRAV1-1-201ENST00000542354 PI4KAP42356 2102 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 WNK1Q9H4A3 2382 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 GPR75-ASB3A0A0A6YYF3 556 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRAMEF27A3QJZ7 478 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 OR14I1A6ND48 311 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 KRTAP9-7A8MTY7 169 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 DCLK1O15075 740 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 BRINP1O60477 761 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CBFA2T3O75081 653 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATG13O75143 517 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CBX7O95931 251 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CTSHP09668 335 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATXN1LP0C7T5 689 aaKnown RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 KLRC2P26717 231 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 HK2P52789 917 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CNTN2Q02246 1040 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 RUNX1T1Q06455 604 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 LTBQ06643 244 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ORC1Q13415 861 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 WTAPQ15007 396 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 DUOXA1Q1HG43 343 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ABCB5Q2M3G0 1257 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 LINC00303Q3SY05 128 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 USP39Q53GS9 565 aaKnown RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 AXDND1Q5T1B0 1012 aaPredicted RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 PMS2CLQ68D20 193 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CCDC81Q6ZN84 652 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATG9AQ7Z3C6 839 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 UBE3BQ7Z3V4 1068 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRIMA1Q86XR5 153 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 PTRH1Q86Y79 214 aaKnown RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 DZIP1Q86YF9 867 aaKnown RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CREG2Q8IUH2 290 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 DHX40Q8IX18 779 aaKnown RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF564Q8TBZ8 553 aaPredicted RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 KCNE4Q8WWG9 221 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 LURAP1Q96LR2 239 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF558Q96NG5 402 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ALG1Q9BT22 464 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 FTHL17Q9BXU8 183 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 RBCK1Q9BYM8 510 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 OSBPL7Q9BZF2 842 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 UNKQ9C0B0 810 aaKnown RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 WNT10AQ9GZT5 417 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 NIF3L1Q9GZT8 377 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRDM16Q9HAZ2 1276 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 SIRT5Q9NXA8 310 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 DUSP13Q9UII6 198 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 RIPK3Q9Y572 518 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 CTDP1Q9Y5B0 961 aaPredicted RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 PCDHB7Q9Y5E2 793 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 ST14Q9Y5Y6 855 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 KIF26AQ9ULI4 1882 aaPredicted RBP2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 MYO16Q9Y6X6 1858 aa2.6□□□□□ -1.99
TRAV1-1-201ENST00000542354 TACC2O95359 2948 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 BAZ2BQ9UIF8 2168 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 RBM47A0AV96 593 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ARHGAP10A1A4S6 786 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZC3H12DA2A288 527 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HEATR9A2RTY3 570 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 FAM221AA4D161 298 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 TBKBP1A7MCY6 615 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 INPPL1O15357 1258 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 EXTL3O43909 919 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 VPS4BO75351 444 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CST3P01034 146 aaPredicted RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 C4BPAP04003 597 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 KRT1P04264 644 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HLA-DOAP06340 250 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 LDHCP07864 332 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 SERPINF2P08697 491 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CDK4P11802 303 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 RLBP1P12271 317 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CCNE1P24864 410 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HOXC13P31276 330 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HOXD12P35452 270 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 GATMP50440 423 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CLCN4P51793 760 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ADCY7P51828 1080 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 MLLT6P55198 1093 aaPredicted RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HDAC4P56524 1084 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 NEXNQ0ZGT2 675 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 PPP2R5BQ15173 497 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 DGKDQ16760 1214 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 KIAA0753Q2KHM9 967 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CERKLQ49MI3 558 aaPredicted RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CCDC157Q569K6 752 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 UBXN11Q5T124 520 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms