RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CBWD3Q5JTY5 395 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 CBWD5Q5RIA9 395 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 CCDC183Q5T5S1 534 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 IRF2BP1Q8IU81 584 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 TOP6BLQ8N6T0 577 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 ZNF461Q8TAF7 563 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 SLC35C1Q96A29 364 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 PGLYRP2Q96PD5 576 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 ADAM7Q9H2U9 754 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
DDX55-204ENST00000536079 TMLHEQ9NVH6 421 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 NXF1Q9UBU9 619 aaKnown RBP19.2■□□□□ 0.66
DDX55-204ENST00000536079 DSEQ9UL01 958 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 CCDC195A0A1B0GUA6 201 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 OR6C75A6NL08 312 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 GABRDO14764 452 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 ZMYND10O75800 440 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 STAU1O95793 577 aaKnown RBP19.19■□□□□ 0.66
DDX55-204ENST00000536079 C1RP00736 705 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 LMO2P25791 158 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 RAP1GAPP47736 663 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 CDH8P55286 799 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 AAK1Q2M2I8 961 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 TJAP1Q5JTD0 557 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 FRMD5Q7Z6J6 570 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 METTL23Q86XA0 190 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 ADGRF2Q8IZF7 708 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 TTC9BQ8N6N2 239 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 SLC7A14Q8TBB6 771 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 LPIN3Q9BQK8 851 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 ZCWPW1Q9H0M4 648 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 PLEKHA4Q9H4M7 779 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 SMYD3Q9H7B4 428 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 SFXN1Q9H9B4 322 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 TMEM8AQ9HCN3 771 aa19.19■□□□□ 0.66
DDX55-204ENST00000536079 ARMCX3Q9UH62 379 aaPredicted RBP19.19■□□□□ 0.66
DDX55-204ENST00000536079 ATP2C2O75185 946 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 PAPLNO95428 1278 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 C8AP07357 584 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 CPB1P15086 417 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 ATF2P15336 505 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 ATICP31939 592 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 PIK3CAP42336 1068 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 ADCY1Q08828 1119 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
DDX55-204ENST00000536079 ZNF699Q32M78 642 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 CCDC40Q4G0X9 1142 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 TCERG1LQ5VWI1 586 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 CAVIN1Q6NZI2 390 aaKnown RBP19.18■□□□□ 0.66
DDX55-204ENST00000536079 C11orf57Q6ZUT1 292 aaPredicted RBP19.18■□□□□ 0.66
DDX55-204ENST00000536079 GPR149Q86SP6 731 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 ATAD1Q8NBU5 361 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 HDAC7Q8WUI4 952 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 SYAP1Q96A49 352 aaPredicted RBP19.18■□□□□ 0.66
DDX55-204ENST00000536079 MMS19Q96T76 1030 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 PKMYT1Q99640 499 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 VRTNQ9H8Y1 702 aa19.18■□□□□ 0.66
DDX55-204ENST00000536079 DDX43Q9NXZ2 648 aaKnown RBP19.18■□□□□ 0.66
DDX55-204ENST00000536079 R3HCC1Q9Y3T6 440 aaKnown RBP19.18■□□□□ 0.66
DDX55-204ENST00000536079 MTMR11A4FU01 709 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 CCL16O15467 120 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 ASS1P00966 412 aaKnown RBP19.17■□□□□ 0.66
DDX55-204ENST00000536079 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
DDX55-204ENST00000536079 GTF2H1P32780 548 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 GPR17Q13304 367 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 SLC39A12Q504Y0 691 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 CMASQ8NFW8 434 aaPredicted RBP19.17■□□□□ 0.66
DDX55-204ENST00000536079 POMKQ9H5K3 350 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 CYP4F11Q9HBI6 524 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 AFF4Q9UHB7 1163 aaKnown RBP19.17■□□□□ 0.66
DDX55-204ENST00000536079 SLC27A5Q9Y2P5 690 aa19.17■□□□□ 0.66
DDX55-204ENST00000536079 TCF20Q9UGU0 1960 aaKnown RBP19.17■□□□□ 0.66
DDX55-204ENST00000536079 ARHGEF37A1IGU5 675 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 SPDYE4A6NLX3 237 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 SOAT2O75908 522 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 PDGFRBP09619 1106 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 MXI1P50539 228 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 NTHL1P78549 312 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 ITIH3Q06033 890 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 SGSM1Q2NKQ1 1148 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 PUS10Q3MIT2 529 aaKnown RBP19.16■□□□□ 0.66
DDX55-204ENST00000536079 TPGS2Q68CL5 300 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 KRT39Q6A163 491 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 TRIM59Q8IWR1 403 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 TCEAL8Q8IYN2 117 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 THEM5Q8N1Q8 247 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 TMEM86AQ8N2M4 240 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 ADAMTS19Q8TE59 1207 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 DPEP3Q9H4B8 488 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 METTL14Q9HCE5 456 aaKnown RBP19.16■□□□□ 0.66
DDX55-204ENST00000536079 CD320Q9NPF0 282 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 ZDHHC7Q9NXF8 308 aa19.16■□□□□ 0.66
DDX55-204ENST00000536079 MYBPHLA2RUH7 354 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 NRG2O14511 850 aaPredicted RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 ERCC5P28715 1186 aaPredicted RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 ASPAP45381 313 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 PSMC1P62191 440 aaKnown RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 TNNC1P63316 161 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms