RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 TMEM121Q9BTD3 319 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 DNPEPQ9ULA0 475 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 ASS1P00966 412 aaKnown RBP16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 CHN1P15882 459 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 CREB1P16220 341 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 SMAD1Q15797 465 aaKnown RBP16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 SGSM1Q2NKQ1 1148 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 KIAA0319LQ8IZA0 1049 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 TRIM11Q96F44 468 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 RASSF4Q9H2L5 321 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 VPS37BQ9H9H4 285 aa16.86■□□□□ 0.29
ATP2C1-224ENST00000533801 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 GPS1Q13098 491 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 TARBP2Q15633 366 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 JOSD2Q8TAC2 188 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 METTL5Q9NRN9 209 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 SETD4Q9NVD3 440 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 RFC1P35251 1148 aaPredicted RBP16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 OGDHQ02218 1023 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 ANKMY2Q8IV38 441 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 C12orf29Q8N999 325 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 ERAP1Q9NZ08 941 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 KLK14Q9P0G3 267 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 GOLGA6L7A0A1B0GV03 622 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 TGFB3P10600 412 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 CCL15Q16663 113 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 OR6B2Q6IFH4 312 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 WDR49Q8IV35 697 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 TWNKQ96RR1 684 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 LPIN3Q9BQK8 851 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 DCLK3Q9C098 648 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 SCINQ9Y6U3 715 aa16.85■□□□□ 0.29
ATP2C1-224ENST00000533801 PDHXO00330 501 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SLC25A27O95847 323 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 LGALS2P05162 132 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 KRT3P12035 628 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 ARSEP51690 589 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 MYCBPAPQ8TBZ2 947 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 IPO4Q8TEX9 1081 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 TRIM6Q9C030 488 aaPredicted RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 MIS12Q9H081 205 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 EPN3Q9H201 632 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 TAF5Q15542 800 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 QPCTQ16769 361 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 CABS1Q96KC9 395 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 PRMT1Q99873 361 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 INTS9Q9NV88 658 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 PARP2Q9UGN5 583 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SOCS7O14512 581 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 DYNC1LI2O43237 492 aaPredicted RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 PPFIA2O75334 1257 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 CYP1A1P04798 512 aaPredicted RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 GJA5P36382 358 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 TMED2Q15363 201 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 FAM102AQ5T9C2 384 aaPredicted RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 LRIG3Q6UXM1 1119 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SRRM1Q8IYB3 904 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SNF8Q96H20 258 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 PCYOX1Q9UHG3 505 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 DOCK1Q14185 1865 aa16.84■□□□□ 0.29
ATP2C1-224ENST00000533801 RIPK2O43353 540 aa16.83■□□□□ 0.29
ATP2C1-224ENST00000533801 PHKA2P46019 1235 aa16.83■□□□□ 0.29
ATP2C1-224ENST00000533801 YARSP54577 528 aaKnown RBP16.83■□□□□ 0.29
ATP2C1-224ENST00000533801 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.29
ATP2C1-224ENST00000533801 ACKR2O00590 384 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 HBP1O60381 514 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 HOXC6P09630 235 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 SNAPC2Q13487 334 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 ZPBP2Q6X784 338 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 FASTKD5Q7L8L6 764 aaKnown RBP16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 ATL2Q8NHH9 583 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 FGD4Q96M96 766 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 TMEM134Q9H6X4 195 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 NGRNQ9NPE2 291 aaKnown RBP16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 GPATCH2LQ9NWQ4 482 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 IP6K2Q9UHH9 426 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 SNX9Q9Y5X1 595 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 CAPN7Q9Y6W3 813 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 ZBTB42B2RXF5 422 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 MYBL1P10243 752 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 PTPN20Q4JDL3 420 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 RFX6Q8HWS3 928 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 CXCL16Q9H2A7 254 aa16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 CPSF3Q9UKF6 684 aaKnown RBP16.83■□□□□ 0.28
ATP2C1-224ENST00000533801 KAT6AQ92794 2004 aa16.82■□□□□ 0.28
ATP2C1-224ENST00000533801 CD48P09326 243 aa16.82■□□□□ 0.28
ATP2C1-224ENST00000533801 PDGFRBP09619 1106 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms