RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TMA16Q96EY4 203 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 P2RX7Q99572 595 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 NAA15Q9BXJ9 866 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 TEX13BQ9BXU2 312 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 IFIH1Q9BYX4 1025 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 CRISPLD2Q9H0B8 497 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ARMT1Q9H993 441 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 POLE3Q9NRF9 147 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ANKEF1Q9NU02 776 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ABCF3Q9NUQ8 709 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 EHD3Q9NZN3 535 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 PDP2Q9P2J9 529 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ASIC3Q9UHC3 531 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 DNAI1Q9UI46 699 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 RABGEF1Q9UJ41 708 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 GJD2Q9UKL4 321 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 FAM169AQ9Y6X4 670 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ZNFX1Q9P2E3 1918 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 COL11A1P12107 1806 aaPredicted RBP7.96□□□□□ -1.13
HDAC3-216ENST00000523088 PLXNA1Q9UIW2 1896 aa7.96□□□□□ -1.13
HDAC3-216ENST00000523088 A0A1W2PPC1 479 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CCDC69A6NI79 296 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 USP17L12C9JPN9 530 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 USP17L21D6R901 530 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CD2BP2O95400 341 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 OPN1MWP04001 364 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 HOXC6P09630 235 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 OPN1MW2P0DN77 364 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 OPN1MW3P0DN78 364 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CAPN3P20807 821 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CTNNA2P26232 953 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 PTGS2P35354 604 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 MTIF2P46199 727 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 VPS41P49754 854 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 SULT1E1P49888 294 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 LIG3P49916 1009 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CLCN6P51797 869 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 GSDMDP57764 484 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 BPIFB4P59827 614 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 TUBB4BP68371 445 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 KRT85P78386 507 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 JAG1P78504 1218 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 PPFIA1Q13136 1202 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 MAP2K5Q13163 448 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 DSC3Q14574 896 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ZYXQ15942 572 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 PCSK7Q16549 785 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 LEXMQ3ZCV2 418 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 PPP1R15BQ5SWA1 713 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 MAP3K21Q5TCX8 1036 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 MFSD14CQ5VZR4 134 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 METTL2BQ6P1Q9 378 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 P3H2Q8IVL5 708 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 COLGALT2Q8IYK4 626 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ABRAQ8N0Z2 381 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 SLC4A11Q8NBS3 891 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 OR6P1Q8NGX9 317 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 OR8K3Q8NH51 312 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ADAM32Q8TC27 787 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 SHC3Q92529 594 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ANKRD36BP1Q96IX9 119 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 TMX3Q96JJ7 454 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 JAKMIP1Q96N16 626 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ASB16Q96NS5 453 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 DEFB118Q96PH6 123 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CDRT15Q96T59 188 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 NDNQ99608 321 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CCDC28BQ9BUN5 200 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 NUSAP1Q9BXS6 441 aaKnown RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 MTMR12Q9C0I1 747 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 FAM192AQ9GZU8 254 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 MIS12Q9H081 205 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 TNKS2Q9H2K2 1166 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 RAD21L1Q9H4I0 556 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 IFT22Q9H7X7 185 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 ACTR5Q9H9F9 607 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-216ENST00000523088 CRLF2Q9HC73 371 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 PCMTD2Q9NV79 361 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 TAS2R7Q9NYW3 318 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 RBPJLQ9UBG7 517 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 SLC7A8Q9UHI5 535 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 C15orf41Q9Y2V0 281 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 PCDHB12Q9Y5F1 795 aa7.96□□□□□ -1.14
HDAC3-216ENST00000523088 LOC100653049A0A140TA62 436 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SYNDIG1LA6NDD5 238 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SPDYE16A6NNV3 312 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 BUB1BO60566 1050 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-216ENST00000523088 FLOT1O75955 427 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 KRT34O76011 436 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 SLC25A27O95847 323 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 CHRNA1P02708 482 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 HMGN1P05114 100 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 NR3C2P08235 984 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 GSTA2P09210 222 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 PRKAR1AP10644 381 aa7.95□□□□□ -1.14
HDAC3-216ENST00000523088 DDX5P17844 614 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms