RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 N4BP2L2Q92802 583 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 STAMBPL1Q96FJ0 436 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 TMEM237Q96Q45 408 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 DHRS4Q9BTZ2 278 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 FRMD8P1Q9BZ68 369 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 ZNF518BQ9C0D4 1074 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 DHX33Q9H6R0 707 aaKnown RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 RPAP3Q9H6T3 665 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 MLXIPLQ9NP71 852 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 TXLNGQ9NUQ3 528 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 DDX56Q9NY93 547 aaKnown RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 RBAKQ9NYW8 714 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 SLC9A2Q9UBY0 812 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 TBK1Q9UHD2 729 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 SEPT9Q9UHD8 586 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 EFR3BQ9Y2G0 817 aa7.05□□□□□ -1.28
CDH12-203ENST00000517378 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 FARP1Q9Y4F1 1045 aaPredicted RBP7.05□□□□□ -1.28
CDH12-203ENST00000517378 LOC102724159A0A0B4J2E5 919 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 SPATA31C2B4DYI2 1134 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 KIF1CO43896 1103 aaKnown RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 TYROBPO43914 113 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ATG7O95352 703 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 SUPT20HL2P0C7V6 817 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 PECAM1P16284 738 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 ARL2P36404 184 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 AP3M2P53677 418 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 MTMR2Q13614 643 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 SPARCL1Q14515 664 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 CRYMQ14894 314 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 PWP2Q15269 919 aaKnown RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 SUPT20HL1Q3ZLR7 823 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 TFDP3Q5H9I0 405 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 EFHC2Q5JST6 749 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 LMBRD2Q68DH5 695 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 SPOCD1Q6ZMY3 1216 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 SEPT14Q6ZU15 432 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 GSTA5Q7RTV2 222 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 POLNQ7Z5Q5 900 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 PASD1Q8IV76 773 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 GPATCH11Q8N954 259 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 GLIS1Q8NBF1 620 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 SLC35B2Q8TB61 432 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 NSUN6Q8TEA1 469 aaKnown RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 PRCCQ92733 491 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 INPP5DQ92835 1189 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 FAM84AQ96KN4 292 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ANKRD27Q96NW4 1050 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 RAB3IPQ96QF0 476 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 PITPNM3Q9BZ71 974 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 FHDC1Q9C0D6 1143 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 TMEM134Q9H6X4 195 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 SAYSD1Q9NPB0 183 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 CYLDQ9NQC7 956 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 GGT7Q9UJ14 662 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ZNRF3Q9ULT6 936 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 MAFBQ9Y5Q3 323 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 USH1CQ9Y6N9 552 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 C3orf70A6NLC5 250 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 TRAFD1O14545 582 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 FAM189A1O60320 539 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 EDF1O60869 148 aaKnown RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 ASS1P00966 412 aaKnown RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 KRT1P04264 644 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 CDKN2BP42772 138 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ACOT2P49753 483 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ARSEP51690 589 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 RPL7AP62424 266 aaKnown RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 SF3A3Q12874 501 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDH12-203ENST00000517378 CBLBQ13191 982 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 DGKZQ13574 1117 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 PIGHQ14442 188 aaPredicted RBP7.04□□□□□ -1.28
CDH12-203ENST00000517378 WDR72Q3MJ13 1102 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ACCSLQ4AC99 568 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 CYP4F22Q6NT55 531 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 MFSD7Q6UXD7 560 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 PHLDB2Q86SQ0 1253 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ZNF398Q8TD17 642 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ZNF606Q8WXB4 792 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ATG4CQ96DT6 458 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 C12orf42Q96LP6 360 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 FAM118BQ9BPY3 351 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 TRABDQ9H4I3 376 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 GRID1Q9ULK0 1009 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 PCDHGC3Q9UN70 934 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 RIPK3Q9Y572 518 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 WDR90Q96KV7 1748 aa7.04□□□□□ -1.28
CDH12-203ENST00000517378 ANK1P16157 1881 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 IGKV6D-21A0A0A0MT36 114 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 GSTTP1A0A1W2PQM5 241 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 DCTN3O75935 186 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ANP32DO95626 131 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 TCF4P15884 667 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 TSHRP16473 764 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ATP4AP20648 1035 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 GLRA2P23416 452 aa7.03□□□□□ -1.28
CDH12-203ENST00000517378 ICAM3P32942 547 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms