RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 PRR20BP86481 221 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 PRR20AP86496 221 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 FCHO2Q0JRZ9 810 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 ECM1Q16610 540 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 STPG1Q5TH74 334 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 C1orf228Q6PIY5 440 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 KBTBD6Q86V97 674 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-216ENST00000506080 TMC8Q8IU68 726 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 APPL2Q8NEU8 664 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 KIFAP3Q92845 792 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 LRRC3BQ96PB8 259 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
PTPN20-216ENST00000506080 LRRC3Q9BY71 257 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
PTPN20-216ENST00000506080 TIMM13Q9Y5L4 95 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-216ENST00000506080 SDK1Q7Z5N4 2213 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 PHLPP2Q6ZVD8 1323 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 MEFVO15553 781 aaPredicted RBP10.03□□□□□ -0.8
PTPN20-216ENST00000506080 EPN2O95208 641 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 ZNF806P0C7X5 589 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 CCDC192P0DO97 292 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 KCNE1P15382 129 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 NPTX2P47972 431 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 EPHB3P54753 998 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 PEX3P56589 373 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 SHC2P98077 582 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 TNK2Q07912 1038 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 DUSP4Q13115 394 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 CCINQ13939 588 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 SEZ6Q53EL9 994 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 CACNA2D4Q7Z3S7 1137 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 GAB3Q8WWW8 586 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 ZBTB45Q96K62 511 aaPredicted RBP10.03□□□□□ -0.8
PTPN20-216ENST00000506080 MRPL4Q9BYD3 311 aaKnown RBP10.03□□□□□ -0.8
PTPN20-216ENST00000506080 CRISPLD1Q9H336 500 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 TUBGCP4Q9UGJ1 667 aa10.03□□□□□ -0.8
PTPN20-216ENST00000506080 GREB1Q4ZG55 1949 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 EPB41L2O43491 1005 aaKnown RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 JAK2O60674 1132 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 RPP40O75818 363 aaKnown RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 SOAT2O75908 522 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 KCNK5O95279 499 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 LARGE1O95461 756 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 MCF2P10911 925 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 HOXA6P31267 233 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 CCT6AP40227 531 aaKnown RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 GUCY1B3Q02153 619 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 YWHAHQ04917 246 aaPredicted RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 SPAG1Q07617 926 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 TRIM29Q14134 588 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 ZNF174Q15697 407 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 ARHGAP29Q52LW3 1261 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 GPR158Q5T848 1215 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 MPZL3Q6UWV2 235 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 GAREM2Q75VX8 874 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 HAUS6Q7Z4H7 955 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 TTC9BQ8N6N2 239 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 BEST2Q8NFU1 509 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 LOXL4Q96JB6 756 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 MKNK1Q9BUB5 465 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 ATXN3LQ9H3M9 355 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 POLR3BQ9NW08 1133 aaPredicted RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 MAFFQ9ULX9 164 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.81
PTPN20-216ENST00000506080 CHD6Q8TD26 2715 aa10.02□□□□□ -0.81
PTPN20-216ENST00000506080 C1QTNF9BB2RNN3 333 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 ABLIM1O14639 778 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 HIP1RO75146 1068 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 PRAMEF12O95522 483 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 PROS1P07225 676 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 OR52Z1P0C646 297 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 C1QTNF9P0C862 333 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 PROZP22891 400 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 GABRR2P28476 465 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 RAP1GAPP47736 663 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 ALDH1A3P47895 512 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 CDR1P51861 262 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 CYP4F8P98187 520 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 FOXC1Q12948 553 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 PLD1Q13393 1074 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 COL9A2Q14055 689 aaPredicted RBP10.01□□□□□ -0.81
PTPN20-216ENST00000506080 SLC10A6Q3KNW5 377 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 HAUS3Q68CZ6 603 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 RNF43Q68DV7 783 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 DNAJB7Q7Z6W7 309 aaPredicted RBP10.01□□□□□ -0.81
PTPN20-216ENST00000506080 USP37Q86T82 979 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
PTPN20-216ENST00000506080 ATAD1Q8NBU5 361 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms