RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 CCDC158Q5M9N0 1113 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 UBXN11Q5T124 520 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 TMTC4Q5T4D3 741 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 DCAF12L1Q5VU92 463 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 SNX30Q5VWJ9 437 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 BICRALQ6AI39 1079 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 RINT1Q6NUQ1 792 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 LRSAM1Q6UWE0 723 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 SYNE3Q6ZMZ3 975 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 C1orf229Q6ZS94 237 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 RAPH1Q70E73 1250 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 RAB11FIP2Q7L804 512 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 KRT74Q7RTS7 529 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 UBE2Q1Q7Z7E8 422 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 NBPF11Q86T75 865 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 MICU3Q86XE3 530 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 DCP2Q8IU60 420 aaKnown RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 CEP97Q8IW35 865 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 CCDC170Q8IYT3 715 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 DNAJC5GQ8N7S2 189 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 VGLL2Q8N8G2 317 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 DCBLD1Q8N8Z6 715 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 OR1N1Q8NGS0 311 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 IFI44Q8TCB0 444 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 SMCR8Q8TEV9 937 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 RAPGEF4Q8WZA2 1011 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 SEC14L1Q92503 715 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 EZH1Q92800 747 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 NSUN4Q96CB9 384 aaKnown RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 GRAMD1AQ96CP6 724 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 KIF1BPQ96EK5 621 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 APOPT1Q96IL0 206 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 HIC2Q96JB3 615 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 FEM1CQ96JP0 617 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 TBC1D32Q96NH3 1257 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 NCAPGQ9BPX3 1015 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 LBHD1Q9BQE6 289 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 REEP2Q9BRK0 252 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 GPATCH1Q9BRR8 931 aaKnown RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 ANP32EQ9BTT0 268 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 TRIM5Q9C035 493 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 MS4A7Q9GZW8 240 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 CXorf56Q9H5V9 222 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 TMEM8AQ9HCN3 771 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 PRDM8Q9NQV8 689 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 GALNT8Q9NY28 637 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 IMPACTQ9P2X3 320 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 TNFRSF10DQ9UBN6 386 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 LPAR3Q9UBY5 353 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 DBR1Q9UK59 544 aaKnown RBP4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 HSF4Q9ULV5 492 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 DERAQ9Y315 318 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 PAXBP1Q9Y5B6 917 aa4.02□□□□□ -1.77
HMGB1P22-201ENST00000505315 LMTK3Q96Q04 1460 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 A0A0A6YYJ9 748 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TCRBV5S2A0A599 114 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 A8MV72 311 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 NT5C1B-RDH14C9J2C7 533 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 C19orf81C9J6K1 198 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 H3BM21 787 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 STX16-NPEPL1H3BU86 382 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 IGF2BP3O00425 579 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 RTCAO00442 366 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 STX16O14662 325 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TERTO14746 1132 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TSPAN4O14817 238 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 KIAA0355O15063 1070 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 VILLO15195 856 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TSPAN3O60637 253 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 PPP6R2O75170 966 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 GJB3O75712 270 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TMEM63AO94886 807 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 UNC5CO95185 931 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SLU7O95391 586 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ABHD16AO95870 558 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 AFPP02771 609 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TXNP10599 105 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 PECAM1P16284 738 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 FAHP16930 419 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 STMN1P16949 149 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TPH1P17752 444 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 YY1P25490 414 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 NFKBIAP25963 317 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 APEX1P27695 318 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 ATP5DP30049 168 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 GCH1P30793 250 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 MSH2P43246 934 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SLC6A9P48067 706 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 HARS2P49590 506 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 RARSP54136 660 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 PNLIPRP1P54315 467 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 NFATC3Q12968 1075 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 DCTN2Q13561 401 aaKnown RBP4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 COG2Q14746 738 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 SEC23BQ15437 767 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 MAN2A1Q16706 1144 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 FAXCQ5TGI0 409 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 RAP1GAP2Q684P5 730 aa4.01□□□□□ -1.77
HMGB1P22-201ENST00000505315 TRIM68Q6AZZ1 485 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms