RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 DAB2IPQ5VWQ8 1189 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 DAW1Q8N136 415 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 ZBTB45Q96K62 511 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-236ENST00000498808 FAM83CQ9BQN1 747 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 TCHPQ9BT92 498 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 OXCT2Q9BYC2 517 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-236ENST00000498808 TMEM134Q9H6X4 195 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 IL21Q9HBE4 155 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
HDAC6-236ENST00000498808 GKN1Q9NS71 199 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 ARHGAP28Q9P2N2 729 aa17.02■□□□□ 0.32
HDAC6-236ENST00000498808 OR6C75A6NL08 312 aa17.01■□□□□ 0.31
HDAC6-236ENST00000498808 RING1Q06587 406 aa17.01■□□□□ 0.31
HDAC6-236ENST00000498808 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
HDAC6-236ENST00000498808 LRSAM1Q6UWE0 723 aa17.01■□□□□ 0.31
HDAC6-236ENST00000498808 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-236ENST00000498808 LPIN3Q9BQK8 851 aa17.01■□□□□ 0.31
HDAC6-236ENST00000498808 THG1LQ9NWX6 298 aaKnown RBP17.01■□□□□ 0.31
HDAC6-236ENST00000498808 ASCC3Q8N3C0 2202 aaKnown RBP17■□□□□ 0.31
HDAC6-236ENST00000498808 RHOBTB1O94844 696 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 LARGE1O95461 756 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 FGF19O95750 216 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 CEACAM1P13688 526 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 CSRP1P21291 193 aaKnown RBP17■□□□□ 0.31
HDAC6-236ENST00000498808 MUTP22033 750 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 LRPAP1P30533 357 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 FOSBP53539 338 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 SPAG1Q07617 926 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 RUNX3Q13761 415 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 PTPAQ15257 358 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 NAIF1Q69YI7 327 aaPredicted RBP17■□□□□ 0.31
HDAC6-236ENST00000498808 USP37Q86T82 979 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 ZCCHC14Q8WYQ9 949 aaKnown RBP17■□□□□ 0.31
HDAC6-236ENST00000498808 SLC46A2Q9BY10 475 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 EBF3Q9H4W6 596 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 LHX6Q9UPM6 363 aa17■□□□□ 0.31
HDAC6-236ENST00000498808 MYO16Q9Y6X6 1858 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 TSC2P49815 1807 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 KIAA1549LQ6ZVL6 1849 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 SOBPA7XYQ1 873 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 CDX4O14627 284 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-236ENST00000498808 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
HDAC6-236ENST00000498808 MYBPC2Q14324 1141 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 KARSQ15046 597 aaKnown RBP16.99■□□□□ 0.31
HDAC6-236ENST00000498808 ITIH5Q86UX2 942 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 RIN3Q8TB24 985 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 TMEM9BQ9NQ34 198 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 CCL26Q9Y258 94 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 DENND4CQ5VZ89 1909 aa16.99■□□□□ 0.31
HDAC6-236ENST00000498808 PATE3B3GLJ2 98 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 OR52Z1P0C646 297 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 CXCL8P10145 99 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 ARSAP15289 507 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 ATF6P18850 670 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC6-236ENST00000498808 CDC25CP30307 473 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 CCT6AP40227 531 aaKnown RBP16.98■□□□□ 0.31
HDAC6-236ENST00000498808 GUCY2FP51841 1108 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 MAPK7Q13164 816 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 DMP1Q13316 513 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-236ENST00000498808 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC6-236ENST00000498808 ZBTB6Q15916 424 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 HAUS3Q68CZ6 603 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 OVOS1Q6IE37 1185 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 SYT13Q7L8C5 426 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 CMTM8Q8IZV2 173 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 RPLP0P6Q8NHW5 317 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-236ENST00000498808 ANKFY1Q9P2R3 1169 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 EBF1Q9UH73 591 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 THADAQ6YHU6 1953 aa16.98■□□□□ 0.31
HDAC6-236ENST00000498808 ANK1P16157 1881 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 PPEF2O14830 753 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 HIP1RO75146 1068 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 APBB3O95704 486 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 TYMPP19971 482 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 DRD1P21728 446 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 GBP1P32455 592 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 GALK1P51570 392 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 CDR1P51861 262 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 DMC1Q14565 340 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 PMS2CLQ68D20 193 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 KIAA1211LQ6NV74 962 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 DSTYKQ6XUX3 929 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 DEFB124Q8NES8 71 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 OR10T2Q8NGX3 314 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 USP13Q92995 863 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-236ENST00000498808 SEPT5Q99719 369 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-236ENST00000498808 HSFX1Q9UBD0 423 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 KIAA1024Q9UPX6 916 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 INVSQ9Y283 1065 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 RBM19Q9Y4C8 960 aaKnown RBP16.97■□□□□ 0.31
HDAC6-236ENST00000498808 CACNA1EQ15878 2313 aa16.97■□□□□ 0.31
HDAC6-236ENST00000498808 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
HDAC6-236ENST00000498808 DMXL2Q8TDJ6 3036 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms