RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 NXF1Q9UBU9 619 aaKnown RBP17.14■□□□□ 0.33
SSBP1-214ENST00000498107 COQ4Q9Y3A0 265 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-214ENST00000498107 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 TPM2P07951 284 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 CPB1P15086 417 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 NOP14P78316 857 aaKnown RBP17.13■□□□□ 0.33
SSBP1-214ENST00000498107 TSPY1Q01534 308 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 KCNC3Q14003 757 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 SOWAHAQ2M3V2 549 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 CBWD6Q4V339 395 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 SCARA3Q6AZY7 606 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 LLGL2Q6P1M3 1020 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 RTL10Q7L3V2 364 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 IRF2BP1Q8IU81 584 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
SSBP1-214ENST00000498107 ZNF461Q8TAF7 563 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 BRWD1Q9NSI6 2320 aa17.13■□□□□ 0.33
SSBP1-214ENST00000498107 KCNJ18B7U540 433 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 GABRDO14764 452 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 TGM5O43548 720 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 TRIM21P19474 475 aaKnown RBP17.12■□□□□ 0.33
SSBP1-214ENST00000498107 WARSP23381 471 aaKnown RBP17.12■□□□□ 0.33
SSBP1-214ENST00000498107 ELF1P32519 619 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 ZNF165P49910 485 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 ARPP19P56211 112 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 ROR1Q01973 937 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 KCNJ12Q14500 433 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 AAK1Q2M2I8 961 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 LIN9Q5TKA1 542 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 LILRA6Q6PI73 481 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 SNX25Q9H3E2 840 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 FAM124BQ9H5Z6 455 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-214ENST00000498107 CYP3A43Q9HB55 503 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 SAMSN1Q9NSI8 373 aaKnown RBP17.12■□□□□ 0.33
SSBP1-214ENST00000498107 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
SSBP1-214ENST00000498107 TSC2P49815 1807 aa17.12■□□□□ 0.33
SSBP1-214ENST00000498107 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
SSBP1-214ENST00000498107 BECN2A8MW95 431 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 LINC01565O15544 149 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 ABLIM3O94929 683 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 EPCAMP16422 314 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
SSBP1-214ENST00000498107 GPR17Q13304 367 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 RSPO2Q6UXX9 243 aaPredicted RBP17.11■□□□□ 0.33
SSBP1-214ENST00000498107 KREMEN2Q8NCW0 462 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 MAN1C1Q9NR34 630 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 AFF4Q9UHB7 1163 aaKnown RBP17.11■□□□□ 0.33
SSBP1-214ENST00000498107 FBXW11Q9UKB1 542 aa17.11■□□□□ 0.33
SSBP1-214ENST00000498107 WDR27A2RRH5 827 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 GTPBP10A4D1E9 387 aaKnown RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 ADAM12O43184 909 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 GLP2RO95838 553 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 ATF2P15336 505 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 CDK11BP21127 795 aaKnown RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 KCNA5P22460 613 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 TPM4P67936 248 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 PUS10Q3MIT2 529 aaKnown RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 CDKAL1Q5VV42 579 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 AOPEPQ8N6M6 819 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 C2orf15Q8WU43 125 aaKnown RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 KBTBD7Q8WVZ9 684 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 SEMA4DQ92854 862 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 PI4K2AQ9BTU6 479 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 SFXN1Q9H9B4 322 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 CD207Q9UJ71 328 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 CDH9Q9ULB4 789 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
SSBP1-214ENST00000498107 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 FAM50BQ9Y247 325 aa17.1■□□□□ 0.33
SSBP1-214ENST00000498107 TBX10O75333 385 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 TBXAS1P24557 533 aaPredicted RBP17.09■□□□□ 0.33
SSBP1-214ENST00000498107 LTBRP36941 435 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 ASPAP45381 313 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
SSBP1-214ENST00000498107 ITIH3Q06033 890 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms