RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 C16orf45Q96MC5 204 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 COG8Q96MW5 612 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 UIMC1Q96RL1 719 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 KCNJ15Q99712 375 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CITED2Q99967 270 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 WDR18Q9BV38 432 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 MAGEB5Q9BZ81 275 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ATXN3LQ9H3M9 355 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PRDM13Q9H4Q3 707 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SMURF1Q9HCE7 757 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SSU72Q9NP77 194 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SLC35C2Q9NQQ7 365 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CHST7Q9NS84 486 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 LMBRD1Q9NUN5 540 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TBCCD1Q9NVR7 557 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PNPOQ9NVS9 261 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 GFOD1Q9NXC2 390 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TRMT1Q9NXH9 659 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TBC1D14Q9P2M4 693 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 DPP7Q9UHL4 492 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ADGRE2Q9UHX3 823 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TMEFF2Q9UIK5 374 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 HOOK1Q9UJC3 728 aaKnown RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF215Q9UL58 517 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 COG5Q9UP83 839 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 SMC3Q9UQE7 1217 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CNPY2Q9Y2B0 182 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 USP15Q9Y4E8 981 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHGC5Q9Y5F6 944 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHGB5Q9Y5G0 923 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 TIMM13Q9Y5L4 95 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 LYVE1Q9Y5Y7 322 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 B3GALT1Q9Y5Z6 326 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 CEP170BQ9Y4F5 1589 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 POLR1AO95602 1720 aaPredicted RBP3.15□□□□□ -1.91
HMGN4-202ENST00000477243 STRCP1A6NGW2 1772 aa3.15□□□□□ -1.91
HMGN4-202ENST00000477243 FLNCQ14315 2725 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PLCH2O75038 1416 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ST20-MTHFSA0A0A6YYL1 179 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NPHP3-ACAD11A0A0J9YXS1 232 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 FAM25EA8MYX2 175 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PTGES3LE9PB15 166 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 STXBP3O00186 592 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ARNTLO00327 626 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PES1O00541 588 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CAPN9O14815 690 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SPTLC2O15270 562 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SGSM2O43147 1006 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SLC7A4O43246 635 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SGTAO43765 313 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 AKR1B10O60218 316 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KIF5CO60282 957 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SRGAP2O75044 1071 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SLC22A3O75751 556 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DGKIO75912 1065 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CSPG5O95196 566 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SLC4A1P02730 911 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 TK1P04183 234 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PRKCBP05771 671 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ATP5BP06576 529 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 LPLP06858 475 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CD3EP07766 207 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CSF1P09603 554 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 HNRNPA1P09651 372 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CLEC2LP0C7M8 214 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KITP10721 976 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GNAT1P11488 350 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 LAMP2P13473 410 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 IFNAR1P17181 557 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 EN2P19622 333 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CYP7A1P22680 504 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 TBXAS1P24557 533 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 MAPK3P27361 379 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 AOAHP28039 575 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 LTKP29376 864 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 HSPA4P34932 840 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 HADHAP40939 763 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 LMAN1P49257 510 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GALK1P51570 392 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RARSP54136 660 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SLC12A2P55011 1212 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 LGALS4P56470 323 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RAC1P63000 192 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 AP2B1P63010 937 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 HTRA4P83105 476 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DSC2Q02487 901 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 YWHAHQ04917 246 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ZBTB16Q05516 673 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DMWDQ09019 674 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 TBC1D8BQ0IIM8 1120 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 MRPL28Q13084 256 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 IFT88Q13099 833 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NOGQ13253 232 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NMIQ13287 307 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 MPP3Q13368 585 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SEMA3AQ14563 771 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KCNB1Q14721 858 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 MORF4L2Q15014 288 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SUZ12Q15022 739 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms