RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 HMGCS2P54868 508 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 HADHBP55084 474 aaKnown RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 SESN3P58005 492 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 USP46P62068 366 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 TTC27Q6P3X3 843 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 PRELID2Q8N945 189 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ZNF653Q96CK0 615 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ERP27Q96DN0 273 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 TGS1Q96RS0 853 aaKnown RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 VCX3BQ9H321 246 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 VCX3AQ9NNX9 186 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 PDP2Q9P2J9 529 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 STOML1Q9UBI4 398 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 EXOC7Q9UPT5 735 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 DIS3Q9Y2L1 958 aaKnown RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 GMEB1Q9Y692 573 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 STBD1O95210 358 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 SKIP12755 728 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 KCNA2P16389 499 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 CCND2P30279 289 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 GMPSP49915 693 aaPredicted RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 MFAP3P55082 362 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ZNF280AP59817 542 aaPredicted RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 CCDC60Q8IWA6 550 aaPredicted RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ANKRD42Q8N9B4 389 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ZNF564Q8TBZ8 553 aaPredicted RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 FAM213AQ9BRX8 229 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 TMEM8AQ9HCN3 771 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 XPNPEP1Q9NQW7 623 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 PIM2Q9P1W9 311 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
CCNL1-216ENST00000475298 NFKBIEO00221 500 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 FAM200BP0CF97 657 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 KRT5P13647 590 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 DRG2P55039 364 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 BACE1P56817 501 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 CYP24A1Q07973 514 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 TAS1R3Q7RTX0 852 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 VSIG1Q86XK7 387 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 UBL4BQ8N7F7 174 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 ARHGEF2Q92974 986 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 NT5C1BQ96P26 610 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 NAP1L3Q99457 506 aaPredicted RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 YIPF2Q9BWQ6 316 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 SPOPO43791 374 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 GPC3P51654 580 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 POLGP54098 1239 aaPredicted RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 YARSP54577 528 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 WNT7BP56706 349 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 C2CD6Q53TS8 623 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 LLGL2Q6P1M3 1020 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 FAM47EQ6ZV65 393 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 DDX1Q92499 740 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 WRNIP1Q96S55 665 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 PHACTR1Q9C0D0 580 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
CCNL1-216ENST00000475298 SYNGAP1Q96PV0 1343 aa13.73□□□□□ -0.21
CCNL1-216ENST00000475298 ARID2Q68CP9 1835 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 MIF4GDA9UHW6 222 aaKnown RBP13.72□□□□□ -0.21
CCNL1-216ENST00000475298 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
CCNL1-216ENST00000475298 PMM2O15305 246 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 PEX10O60683 326 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 PHF2O75151 1096 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
CCNL1-216ENST00000475298 OATP04181 439 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 GZMAP12544 262 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 TAC1P20366 129 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 PTGIRP43119 386 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 SNRPFP62306 86 aaKnown RBP13.72□□□□□ -0.21
CCNL1-216ENST00000475298 CDR2Q01850 454 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 PRKCEQ02156 737 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 TMEM132BQ14DG7 1078 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 LONRF1Q17RB8 773 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 ARHGAP18Q8N392 663 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 CFAP61Q8NHU2 1237 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 CD101Q93033 1021 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 MFSD14AQ96MC6 490 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 TLE6Q9H808 572 aa13.72□□□□□ -0.21
CCNL1-216ENST00000475298 HSFX1Q9UBD0 423 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms