RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GOLGA5Q8TBA6 731 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 CD99L2Q8TCZ2 262 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 SCFD1Q8WVM8 642 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 NELFBQ8WX92 580 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 ANP32BQ92688 251 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 GLG1Q92896 1179 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 PDLIM2Q96JY6 352 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 Q96M66 194 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 HSPA12BQ96MM6 686 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 CTAGE1Q96RT6 745 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 PPP1R9BQ96SB3 815 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 KATNAL1Q9BW62 490 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 NFKBIZQ9BYH8 718 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 ARHGAP39Q9C0H5 1083 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 RNPEPQ9H4A4 650 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 ATP6V0A4Q9HBG4 840 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 SPC25Q9HBM1 224 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 SLC39A2Q9NP94 309 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 XPNPEP1Q9NQW7 623 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 SEMA3GQ9NS98 782 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 TYW1Q9NV66 732 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 DMAC2Q9NW81 257 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 UBP1Q9NZI7 540 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 KIAA1522Q9P206 1035 aaPredicted RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 LIMA1Q9UHB6 759 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 ZHX1Q9UKY1 873 aaPredicted RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 NFE2L3Q9Y4A8 694 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 PCDHGB7Q9Y5F8 929 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 NRCAMQ92823 1304 aa6□□□□□ -1.45
VPS41-211ENST00000466017 NPHP3-ACAD11A0A0J9YXS1 232 aa6□□□□□ -1.45
VPS41-211ENST00000466017 MBLAC1A4D2B0 266 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 RSPH10B2B2RC85 870 aa6□□□□□ -1.45
VPS41-211ENST00000466017 KIAA0391O15091 583 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 MAPK13O15264 365 aa6□□□□□ -1.45
VPS41-211ENST00000466017 CALUO43852 315 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 ADCY3O60266 1144 aa6□□□□□ -1.45
VPS41-211ENST00000466017 CABYRO75952 493 aa6□□□□□ -1.45
VPS41-211ENST00000466017 PIGRP01833 764 aa6□□□□□ -1.45
VPS41-211ENST00000466017 RSPH10BP0C881 870 aa6□□□□□ -1.45
VPS41-211ENST00000466017 RARBP10826 455 aa6□□□□□ -1.45
VPS41-211ENST00000466017 GNAT1P11488 350 aa6□□□□□ -1.45
VPS41-211ENST00000466017 RPL13P26373 211 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 EEF1GP26641 437 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 HOXC8P31273 242 aa6□□□□□ -1.45
VPS41-211ENST00000466017 POLGP54098 1239 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 RACK1P63244 317 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 POU5F1Q01860 360 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 CACNB2Q08289 660 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 HSP90AA2PQ14568 343 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 PCBP1Q15365 356 aaKnown RBP eCLIP6□□□□□ -1.45
VPS41-211ENST00000466017 IFI16Q16666 785 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 FAM187BQ17R55 369 aa6□□□□□ -1.45
VPS41-211ENST00000466017 MTERF2Q49AM1 385 aa6□□□□□ -1.45
VPS41-211ENST00000466017 SNAP47Q5SQN1 464 aa6□□□□□ -1.45
VPS41-211ENST00000466017 ODR4Q5SWX8 454 aa6□□□□□ -1.45
VPS41-211ENST00000466017 UTP14CQ5TAP6 766 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 PLA2G4FQ68DD2 849 aa6□□□□□ -1.45
VPS41-211ENST00000466017 APTXQ7Z2E3 356 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 HAUS6Q7Z4H7 955 aa6□□□□□ -1.45
VPS41-211ENST00000466017 RPAINQ86UA6 219 aa6□□□□□ -1.45
VPS41-211ENST00000466017 TLK2Q86UE8 772 aa6□□□□□ -1.45
VPS41-211ENST00000466017 SFR1Q86XK3 245 aa6□□□□□ -1.45
VPS41-211ENST00000466017 IRF2BP1Q8IU81 584 aa6□□□□□ -1.45
VPS41-211ENST00000466017 FAM114A1Q8IWE2 563 aa6□□□□□ -1.45
VPS41-211ENST00000466017 NME8Q8N427 588 aa6□□□□□ -1.45
VPS41-211ENST00000466017 AOPEPQ8N6M6 819 aa6□□□□□ -1.45
VPS41-211ENST00000466017 PCSK9Q8NBP7 692 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 KCT2Q8NC54 265 aa6□□□□□ -1.45
VPS41-211ENST00000466017 TMEM161BQ8NDZ6 487 aa6□□□□□ -1.45
VPS41-211ENST00000466017 BAHD1Q8TBE0 780 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 RAET1EQ8TD07 263 aa6□□□□□ -1.45
VPS41-211ENST00000466017 KAT2BQ92831 832 aa6□□□□□ -1.45
VPS41-211ENST00000466017 MRFAP1L1Q96HT8 127 aa6□□□□□ -1.45
VPS41-211ENST00000466017 EAF1Q96JC9 268 aaPredicted RBP6□□□□□ -1.45
VPS41-211ENST00000466017 IFT74Q96LB3 600 aa6□□□□□ -1.45
VPS41-211ENST00000466017 CCDC43Q96MW1 224 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 ACCSQ96QU6 501 aa6□□□□□ -1.45
VPS41-211ENST00000466017 TSG101Q99816 390 aa6□□□□□ -1.45
VPS41-211ENST00000466017 SRRTQ9BXP5 876 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 MRPL44Q9H9J2 332 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 MBNL3Q9NUK0 354 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 FANCLQ9NW38 375 aa6□□□□□ -1.45
VPS41-211ENST00000466017 ARHGAP28Q9P2N2 729 aa6□□□□□ -1.45
VPS41-211ENST00000466017 REV1Q9UBZ9 1251 aa6□□□□□ -1.45
VPS41-211ENST00000466017 TPX2Q9ULW0 747 aaKnown RBP6□□□□□ -1.45
VPS41-211ENST00000466017 EXOC7Q9UPT5 735 aa6□□□□□ -1.45
VPS41-211ENST00000466017 SLC5A6Q9Y289 635 aa6□□□□□ -1.45
VPS41-211ENST00000466017 ST14Q9Y5Y6 855 aa6□□□□□ -1.45
VPS41-211ENST00000466017 STYXL1Q9Y6J8 313 aa6□□□□□ -1.45
VPS41-211ENST00000466017 DOCK5Q9H7D0 1870 aa6□□□□□ -1.45
VPS41-211ENST00000466017 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 SMIM35A0A1B0GVV1 85 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 CETN3O15182 167 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 TGFB1I1O43294 461 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 ADCY6O43306 1168 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 CBFA2T2O43439 604 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 USO1O60763 962 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 PRPF6O94906 941 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 HTR3BO95264 441 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms