RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ANKRD20A1Q5TYW2 823 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 ANKRD20A3Q5VUR7 823 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 ANKRD22Q5VYY1 191 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 CRELD2Q6UXH1 353 aaPredicted RBP20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 AKT1S1Q96B36 256 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 SLITRK1Q96PX8 696 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 TCHPQ9BT92 498 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 MSTO1Q9BUK6 570 aa20.67■□□□□ 0.9
CNEP1R1-203ENST00000458059 MYH9P35579 1960 aaKnown RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 DNALI1O14645 258 aaPredicted RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 C4BPAP04003 597 aaKnown RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 GDF10P55107 478 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 OSTNP61366 133 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 ZNF252P-AS1Q0IIN9 211 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 CDR2LQ86X02 465 aaPredicted RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 TTC8Q8TAM2 541 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 MRPL47Q9HD33 250 aaKnown RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 C2orf71A6NGG8 1288 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 PMM2O15305 246 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 PSTPIP1O43586 416 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 CST3P01034 146 aaPredicted RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 POTEJP0CG39 1038 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 HIRAP54198 1017 aaPredicted RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 SEPT7Q16181 437 aaKnown RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 BZW1Q7L1Q6 419 aaKnown RBP20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 KATNAL2Q8IYT4 538 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 ZNF606Q8WXB4 792 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 FAM81BQ96LP2 452 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 SENP7Q9BQF6 1050 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 CYP26B1Q9NR63 512 aa20.66■□□□□ 0.9
CNEP1R1-203ENST00000458059 EXTL3O43909 919 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 ENTPD5O75356 428 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 CCND1P24385 295 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 TNFSF9P41273 254 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 MSS51Q4VC12 460 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 LONP2Q86WA8 852 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 EXD1Q8NHP7 514 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 AGTPBP1Q9UPW5 1226 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 NUMBLQ9Y6R0 609 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 A0A0G2JND7 137 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 GM2AP17900 193 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 WDR72Q3MJ13 1102 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 TAF1BQ53T94 588 aaPredicted RBP20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 DPH6Q7L8W6 267 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 ASAP3Q8TDY4 903 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 LRRN4Q8WUT4 740 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 CNKSR1Q969H4 720 aa20.65■□□□□ 0.9
CNEP1R1-203ENST00000458059 SFNP31947 248 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 TAF11Q15544 211 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 RNF43Q68DV7 783 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 DNAJC24Q6P3W2 148 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 RHPN2Q8IUC4 686 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 TRIM11Q96F44 468 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 EURLQ9NYK6 297 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 PCSK1NQ9UHG2 260 aa20.64■□□□□ 0.9
CNEP1R1-203ENST00000458059 RGS20O76081 388 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 NEFHP12036 1026 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 CETN2P41208 172 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 BBS9Q3SYG4 887 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 SPOCD1Q6ZMY3 1216 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 ENOSF1Q7L5Y1 443 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 MTDHQ86UE4 582 aaKnown RBP20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 K7ERI5 159 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 PIK3R2O00459 728 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 ONECUT3O60422 494 aaPredicted RBP20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 ZBED4O75132 1171 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 BPIFB4P59827 614 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 NCOA4Q13772 614 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 MAPK6Q16659 721 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 C15orf39Q6ZRI6 1047 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 RFX8Q6ZV50 586 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 NIPA1Q7RTP0 329 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 OTOAQ7RTW8 1153 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 SAMD3Q8N6K7 520 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 EMC1Q8N766 993 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 BBOF1Q8ND07 529 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 DEPTORQ8TB45 409 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 ATP6V0A1Q93050 837 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 SPDL1Q96EA4 605 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 PARVAQ9NVD7 372 aa20.64■□□□□ 0.89
CNEP1R1-203ENST00000458059 TCRBV7S3A2A0A539 114 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 WNT10BO00744 389 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 PDHA1P08559 390 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 ALADP13716 330 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 ACTR2P61160 394 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 SNRPFP62306 86 aaKnown RBP20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 EMC2Q15006 297 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 JPH1Q9HDC5 661 aaPredicted RBP20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 SLC17A7Q9P2U7 560 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 TJP3O95049 919 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 MAP3K6O95382 1288 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 RAD23BP54727 409 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 FNBP1LQ5T0N5 605 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 PLEKHA7Q6IQ23 1121 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 RPAINQ86UA6 219 aa20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 PRR11Q96HE9 360 aaPredicted RBP20.63■□□□□ 0.89
CNEP1R1-203ENST00000458059 TBC1D10AQ9BXI6 508 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms