RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SYKP43405 635 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 DIO1P49895 249 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 NFIAQ12857 509 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 NR5A1Q13285 461 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ANO6Q4KMQ2 910 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 TTC19Q6DKK2 380 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 IL27RAQ6UWB1 636 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 GK5Q6ZS86 529 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 MARK2Q7KZI7 788 aaKnown RBP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 BLIDQ8IZY5 108 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 GMCL1P1Q8NEA9 526 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 RASSF8Q8NHQ8 419 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 NKD1Q969G9 470 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 C18orf8Q96DM3 657 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 PLEKHG4BQ96PX9 1271 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 ACPTQ9BZG2 426 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 SERPINB13Q9UIV8 391 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 VPS28Q9UK41 221 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
BRCC3-208ENST00000453705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.31□□□□□ -1.08
BRCC3-208ENST00000453705 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 PLA2G6O60733 806 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 DDHD2O94830 711 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 EEF2P13639 858 aaKnown RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 GDI1P31150 447 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 LONP1P36776 959 aaKnown RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 EVX2Q03828 476 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 CUL2Q13617 745 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 LASP1Q14847 261 aaKnown RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 IQSEC1Q6DN90 963 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 PGM2L1Q6PCE3 622 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 CLEC2AQ6UVW9 174 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 NXPE1Q8N323 547 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 KCTD6Q8NC69 237 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 AGBL3Q8NEM8 1001 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 CEP70Q8NHQ1 597 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 DYNLL2Q96FJ2 89 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 FAM193BQ96PV7 902 aaPredicted RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 ARHGAP39Q9C0H5 1083 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 DDX4Q9NQI0 724 aaKnown RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 POLR3GO15318 223 aaPredicted RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 CYTH3O43739 400 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 KCNJ13O60928 360 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 PRDM1O75626 825 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 RFPL3O75679 317 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 TTLL1O95922 423 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 IFNB1P01574 187 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 ACSL1P33121 698 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 GCGRP47871 477 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 PRELPP51888 382 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 COASYQ13057 564 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 SLC14A1Q13336 389 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 BBS9Q3SYG4 887 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 TTC38Q5R3I4 469 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 ZCCHC12Q6PEW1 402 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 PLEKHM3Q6ZWE6 761 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
BRCC3-208ENST00000453705 RFWD2Q8NHY2 731 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 HTRA1Q92743 480 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 VPS39Q96JC1 886 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 RSRP1Q9BUV0 290 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 CUEDC2Q9H467 287 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 GJB4Q9NTQ9 266 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF358Q9NW07 568 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 FAM153AQ9UHL3 310 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 RPS6KA6Q9UK32 745 aa8.3□□□□□ -1.08
BRCC3-208ENST00000453705 FAM86C2PA6NEL3 165 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 KERAO60938 352 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF165P49910 485 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 ATN1P54259 1190 aaPredicted RBP8.29□□□□□ -1.08
BRCC3-208ENST00000453705 SCAND1P57086 179 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 RELQ04864 619 aaPredicted RBP8.29□□□□□ -1.08
BRCC3-208ENST00000453705 KIF5AQ12840 1032 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 TRPC3Q13507 836 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 CHRDL2Q6WN34 429 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF783Q6ZMS7 281 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 CPOQ8IVL8 374 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 DNAJB8Q8NHS0 232 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 CCHCR1Q8TD31 782 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 NMRK2Q9NPI5 230 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 USP40Q9NVE5 1235 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 PI4KBQ9UBF8 816 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 KCNH3Q9ULD8 1083 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 KCNJ14Q9UNX9 436 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 TLL2Q9Y6L7 1015 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 SGK1O00141 431 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 GNA11P29992 359 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 RECQLP46063 649 aaPredicted RBP8.29□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF75DP51815 510 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 TRAF1Q13077 416 aa8.29□□□□□ -1.08
BRCC3-208ENST00000453705 AOC3Q16853 763 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms