RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 WDR92Q96MX6 357 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 ZMAT2Q96NC0 199 aaKnown RBP5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 RBM15Q96T37 977 aaKnown RBP eCLIP5.98□□□□□ -1.452e-11■■□□□ 12.8
TM9SF3-202ENST00000443638 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 PCDHAC1Q9H158 963 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 ELAC1Q9H777 363 aaKnown RBP5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 SEPSECSQ9HD40 501 aaKnown RBP5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 TLR9Q9NR96 1032 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 TMEM140Q9NV12 185 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 MID2Q9UJV3 735 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 ACTL7AQ9Y615 435 aa5.98□□□□□ -1.45
TM9SF3-202ENST00000443638 BICDL2A1A5D9 508 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 P4HA2O15460 535 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 PSPNO60542 156 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 PTP4A3O75365 173 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 GASTP01350 101 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 DNTTP04053 509 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 ANXA1P04083 346 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 CSF1P09603 554 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 HNRNPA1P09651 372 aaKnown RBP eCLIP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 SBK3P0C264 359 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 TGFB3P10600 412 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 MYCLP12524 364 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 IDEP14735 1019 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 SLC11A2P49281 568 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 KRT83P78385 493 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 IKZF1Q13422 519 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 VWA3BQ502W6 1294 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 TIGD5Q53EQ6 642 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 CCDC129Q6ZRS4 1044 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 RINLQ6ZS11 566 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 YAF2Q8IY57 180 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 NRSN1Q8IZ57 195 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 DNAJC5GQ8N7S2 189 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 OR6Y1Q8NGX8 325 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 BCL7CQ8WUZ0 217 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 UHRF1Q96T88 793 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 RETREG1Q9H6L5 497 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 ZCCHC17Q9NP64 241 aaKnown RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 HEYLQ9NQ87 328 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 G6PC2Q9NQR9 355 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 DLL4Q9NR61 685 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 RLIMQ9NVW2 624 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 SAE1Q9UBE0 346 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 ZMYND8Q9ULU4 1186 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 CA14Q9ULX7 337 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 ARHGAP26Q9UNA1 814 aa5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 MAGED1Q9Y5V3 778 aaPredicted RBP5.97□□□□□ -1.45
TM9SF3-202ENST00000443638 FAM170AA1A519 330 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 MASP2O00187 686 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CYP26A1O43174 497 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 NTSR2O95665 410 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 MLYCDO95822 493 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 PECAM1P16284 738 aaPredicted RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 ALOX12P18054 663 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 TGM1P22735 817 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 POLD2P49005 469 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 AARSP49588 968 aaKnown RBP eCLIP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CCT4P50991 539 aaKnown RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 ERVFRD-1P60508 538 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 NOMO3P69849 1222 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 PRR5P85299 388 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 TRIM60Q495X7 471 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 PABPC1LQ4VXU2 614 aaKnown RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 ZKSCAN2Q63HK3 967 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 FCRL6Q6DN72 434 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 NFRKBQ6P4R8 1299 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CRTC1Q6UUV9 634 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 ETV3LQ6ZN32 361 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CCDC117Q8IWD4 279 aaPredicted RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CCDC28AQ8IWP9 274 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CNPY4Q8N129 248 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 REPS2Q8NFH8 660 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 WDR48Q8TAF3 677 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 SPSB4Q96A44 273 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 NSUN4Q96CB9 384 aaKnown RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 C11orf54Q9H0W9 315 aaPredicted RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 TAF1DQ9H5J8 278 aaPredicted RBP5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 TBX20Q9UMR3 447 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 DAPP1Q9UN19 280 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 HCFC2Q9Y5Z7 792 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 CYP46A1Q9Y6A2 500 aa5.96□□□□□ -1.46
TM9SF3-202ENST00000443638 OR2W5A6NFC9 320 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 GRM6O15303 877 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 ITGA10O75578 1167 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 INMTO95050 263 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 UNC5CO95185 931 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 GJB1P08034 283 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 FURINP09958 794 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 IL2RBP14784 551 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 FOSL1P15407 271 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 CHMP24386 653 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 MST1P26927 711 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 ACVR2AP27037 513 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 PHKA1P46020 1223 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 UCP3P55916 312 aa5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 POU6F2P78424 691 aaPredicted RBP5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.95□□□□□ -1.46
TM9SF3-202ENST00000443638 NSUN2Q08J23 767 aaKnown RBP eCLIP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms