RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CT47A1Q5JQC4 288 aaPredicted RBP19.02■□□□□ 0.63
CCDC188-201ENST00000439765 LIN9Q5TKA1 542 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 OVOS1Q6IE37 1185 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 SLC8B1Q6J4K2 584 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 KLHL10Q6JEL2 608 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 TRAPPC11Q7Z392 1133 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 ADSSL1Q8N142 457 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 TDRD5Q8NAT2 981 aaKnown RBP19.02■□□□□ 0.63
CCDC188-201ENST00000439765 PBXIP1Q96AQ6 731 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 DNAJC25Q9H1X3 360 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 DPP7Q9UHL4 492 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 DACH1Q9UI36 760 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 SORCS3Q9UPU3 1222 aa19.02■□□□□ 0.63
CCDC188-201ENST00000439765 R3HCC1Q9Y3T6 440 aaKnown RBP19.02■□□□□ 0.63
CCDC188-201ENST00000439765 TBC1D4O60343 1298 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 PAPLNO95428 1278 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 TYMPP19971 482 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 PAX3P23760 479 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 RPL13P26373 211 aaKnown RBP19.01■□□□□ 0.63
CCDC188-201ENST00000439765 DLG4P78352 724 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 STIM1Q13586 685 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 CCDC149Q6ZUS6 474 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 C11orf57Q6ZUT1 292 aaPredicted RBP19.01■□□□□ 0.63
CCDC188-201ENST00000439765 FAM186BQ8IYM0 893 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 PLCD3Q8N3E9 789 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 SLC7A14Q8TBB6 771 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 PARD3BQ8TEW8 1205 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 ZNF516Q92618 1163 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 BORCS6Q96GS4 357 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 TSPY26PQ9H489 355 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 PLEKHA4Q9H4M7 779 aa19.01■□□□□ 0.63
CCDC188-201ENST00000439765 PSMA7O14818 248 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 OAZ2O95190 189 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 C8AP07357 584 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 OR4Q2P0C623 313 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 ADAM9Q13443 819 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 BIRC3Q13489 604 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 MTMR3Q13615 1198 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 WSCD1Q658N2 575 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 CENPPQ6IPU0 288 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 CYP26C1Q6V0L0 522 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 UBALD2Q8IYN6 164 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 FBXL6Q8N531 539 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 HDAC7Q8WUI4 952 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 DHTKD1Q96HY7 919 aaPredicted RBP19■□□□□ 0.63
CCDC188-201ENST00000439765 HPDLQ96IR7 371 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 TSG101Q99816 390 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 DSEQ9UL01 958 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 SNX9Q9Y5X1 595 aa19■□□□□ 0.63
CCDC188-201ENST00000439765 CCDC195A0A1B0GUA6 201 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 ARHGEF37A1IGU5 675 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 CLSTN1O94985 981 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 CYP11A1P05108 521 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 TRIM49P0CI25 452 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 TRIM49CP0CI26 452 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 TDRD10Q5VZ19 366 aaKnown RBP18.99■□□□□ 0.63
CCDC188-201ENST00000439765 ANKRD40Q6AI12 368 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 SUGP1Q8IWZ8 645 aaKnown RBP18.99■□□□□ 0.63
CCDC188-201ENST00000439765 ZNF461Q8TAF7 563 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 L1RE1Q9UN81 338 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 CTNND2Q9UQB3 1225 aa18.99■□□□□ 0.63
CCDC188-201ENST00000439765 NOTCH4Q99466 2003 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 PHACTR2O75167 634 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 ZMYND10O75800 440 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 CAVIN2O95810 425 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 PSMC2P35998 433 aaKnown RBP18.98■□□□□ 0.63
CCDC188-201ENST00000439765 CDR1P51861 262 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 METTL23Q86XA0 190 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 OR10T2Q8NGX3 314 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 PGLYRP2Q96PD5 576 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 TMEM209Q96SK2 561 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 NAT10Q9H0A0 1025 aaKnown RBP18.98■□□□□ 0.63
CCDC188-201ENST00000439765 ZDHHC7Q9NXF8 308 aa18.98■□□□□ 0.63
CCDC188-201ENST00000439765 OR6C75A6NL08 312 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 PRRG1O14668 218 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 HUS1O60921 280 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 CST3P01034 146 aaPredicted RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 EPB41P11171 864 aaKnown RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 KRT13P13646 458 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 CCNE1P24864 410 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 VAMP7P51809 220 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 CLDN10P78369 228 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 LRRC63Q05C16 580 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 ADCY1Q08828 1119 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 TRPC3Q13507 836 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 PPM1LQ5SGD2 360 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 RNF19BQ6ZMZ0 732 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 INTS8Q75QN2 995 aaKnown RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 OTOP3Q7RTS5 596 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 PDCL2Q8N4E4 241 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 TMC2Q8TDI7 906 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 NELFBQ8WX92 580 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 SMG7Q92540 1137 aaKnown RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 ZNF707Q96C28 371 aaPredicted RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 ACSF2Q96CM8 615 aaPredicted RBP18.97■□□□□ 0.63
CCDC188-201ENST00000439765 BPIFA3Q9BQP9 254 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 MMRN2Q9H8L6 949 aa18.97■□□□□ 0.63
CCDC188-201ENST00000439765 GDAP2Q9NXN4 497 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms