RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 CYP4F11Q9HBI6 524 aa9.57□□□□□ -0.88
NIF3L1-206ENST00000416651 MBD1Q9UIS9 605 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-206ENST00000416651 INSL5Q9Y5Q6 135 aa9.57□□□□□ -0.88
NIF3L1-206ENST00000416651 TRIP11Q15643 1979 aa9.57□□□□□ -0.88
NIF3L1-206ENST00000416651 A0A1W2PRU2 124 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 TBX3O15119 743 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 CHADO15335 359 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 PRAMEF12O95522 483 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 SFNP31947 248 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 MCM5P33992 734 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 CLCNKBP51801 687 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 SOX4Q06945 474 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 FCHO2Q0JRZ9 810 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 TWF1Q12792 350 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 CAPSQ13938 189 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 EMC2Q15006 297 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 PIP4P1Q86T03 277 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 NOSTRINQ8IVI9 506 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 PNPLA1Q8N8W4 532 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 DAGLBQ8NCG7 672 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 ZNF461Q8TAF7 563 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 DEPDC1BQ8WUY9 529 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 RIT2Q99578 217 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 ZMYND12Q9H0C1 365 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 CRISPLD1Q9H336 500 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 ENAMQ9NRM1 1142 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 TMEM74BQ9NUR3 256 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 RGL1Q9NZL6 768 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 ACACAQ13085 2346 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 ATXN2Q99700 1313 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-206ENST00000416651 SHROOM3Q8TF72 1996 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 ZNF462Q96JM2 2506 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 FAM221BA6H8Z2 402 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 PRRG1O14668 218 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 KHNYNO15037 678 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 SGSM2O43147 1006 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 RECQL4O94761 1208 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 PLA2G2AP14555 144 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 GBP1P32455 592 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 PSMC5P62195 406 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 NUCB1Q02818 461 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 SPIRE1Q08AE8 756 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 RTN1Q16799 776 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 PFKFB3Q16875 520 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 EEF1DP3Q658K8 133 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 TRIM68Q6AZZ1 485 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 ARMCX6Q7L4S7 300 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 RAB44Q7Z6P3 723 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 SGMS1Q86VZ5 419 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 RALGPS2Q86X27 583 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 TMC8Q8IU68 726 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 ARID3BQ8IVW6 561 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 YAF2Q8IY57 180 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 REXO1Q8N1G1 1221 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 RIN3Q8TB24 985 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 ETNPPLQ8TBG4 499 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 PIGKQ92643 395 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 TRIM6Q9C030 488 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 DNAJC25Q9H1X3 360 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 C8orf33Q9H7E9 229 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 ZNF395Q9H8N7 513 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 SLC8A2Q9UPR5 921 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 URB1O60287 2271 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 KALRNO60229 2985 aa9.55□□□□□ -0.88
NIF3L1-206ENST00000416651 MYO16Q9Y6X6 1858 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 A0A1B0GUA9 196 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 CCDC194A0A1B0GVG4 234 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 ESPNB1AK53 854 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 SLC27A2O14975 620 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 SLC37A4O43826 429 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 GLRA2P23416 452 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 MLLT6P55198 1093 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 CTTNQ14247 550 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 PMS2CLQ68D20 193 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 TCEAL8Q8IYN2 117 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 TMTC2Q8N394 836 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 GLIS3Q8NEA6 775 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 TMEM209Q96SK2 561 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 SPOCK3Q9BQ16 436 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 POLR3CQ9BUI4 534 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 SLITRK6Q9H5Y7 841 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 HPS4Q9NQG7 708 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 GDAQ9Y2T3 454 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NIF3L1-206ENST00000416651 PTPRDP23468 1912 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 CCDC163A0A0D9SF12 145 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 EIF4E1BA6NMX2 242 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 GOLGA8AA7E2F4 631 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 ZNF197O14709 1029 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 SOAT2O75908 522 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 AKAP3O75969 853 aa9.53□□□□□ -0.88
NIF3L1-206ENST00000416651 B3GAT3O94766 335 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms