RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ASAH2Q9NR71 780 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 FBXL21Q9UKT6 434 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 DUSP12Q9UNI6 340 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
RFFL-204ENST00000414419 MTMR11A4FU01 709 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 PDXKO00764 312 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 CALUO43852 315 aaPredicted RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 PHACTR2O75167 634 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 RHOBTB3O94955 611 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 TUFMP49411 452 aaKnown RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 SMARCB1Q12824 385 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 DPYDQ12882 1025 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 TRPC3Q13507 836 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 PSMD6Q15008 389 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 SLC44A3Q8N4M1 653 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 FBXL6Q8N531 539 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 ATAD1Q8NBU5 361 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 LEMD2Q8NC56 503 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 OR5B17Q8NGF7 314 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 OR10T2Q8NGX3 314 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 FAM200AQ8TCP9 573 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 C2orf15Q8WU43 125 aaKnown RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 MCRS1Q96EZ8 462 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 ASIC4Q96FT7 647 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 HPDLQ96IR7 371 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 TMEM209Q96SK2 561 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 SEPT5Q99719 369 aaPredicted RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 SMOC2Q9H3U7 446 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 AVENQ9NQS1 362 aaPredicted RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 GDAP2Q9NXN4 497 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 DDX43Q9NXZ2 648 aaKnown RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 GDE1Q9NZC3 331 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 CEP72Q9P209 647 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 HSFX1Q9UBD0 423 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 RAPGEFL1Q9UHV5 662 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
RFFL-204ENST00000414419 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 YIPF1Q9Y548 306 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 ZDBF2Q9HCK1 2354 aa12.05□□□□□ -0.48
RFFL-204ENST00000414419 ANHXE9PGG2 379 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 CLSTN1O94985 981 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 MYL4P12829 197 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 LHX1P48742 406 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 HTR4Q13639 388 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 KCNB1Q14721 858 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 VEPH1Q14D04 833 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 TAF12Q16514 161 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 MGAT5BQ3V5L5 792 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 DPH6Q7L8W6 267 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 TRAPPC11Q7Z392 1133 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 ITIH5Q86UX2 942 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 NPAS3Q8IXF0 933 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 PDCL2Q8N4E4 241 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 TOP6BLQ8N6T0 577 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 SPATA18Q8TC71 538 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 SPPL2BQ8TCT7 592 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 FAM84AQ96KN4 292 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 MMS19Q96T76 1030 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 CGRRF1Q99675 332 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 SIX4Q9UIU6 781 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 L1RE1Q9UN81 338 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 FRMD4BQ9Y2L6 1034 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 ASB3Q9Y575 518 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 NUMBLQ9Y6R0 609 aa12.04□□□□□ -0.48
RFFL-204ENST00000414419 ZNF638Q14966 1978 aaKnown RBP12.04□□□□□ -0.48
RFFL-204ENST00000414419 ZNF318Q5VUA4 2279 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 STK25O00506 426 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 NARSO43776 548 aaKnown RBP12.03□□□□□ -0.48
RFFL-204ENST00000414419 MICAL2O94851 1124 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 NR3C1P04150 777 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 CFHP08603 1231 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 SRFP11831 508 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 CEBPBP17676 345 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 RFX1P22670 979 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 PCSK1P29120 753 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 AP3M2P53677 418 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 FAM160A1Q05DH4 1040 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 NFE2Q16621 373 aaPredicted RBP12.03□□□□□ -0.48
RFFL-204ENST00000414419 SLC5A9Q2M3M2 681 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 CEP135Q66GS9 1140 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 PARM1Q6UWI2 310 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 SLC9A9Q8IVB4 645 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 ADGRF2Q8IZF7 708 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
RFFL-204ENST00000414419 CXorf38Q8TB03 319 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 FGF14Q92915 247 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 CRISPLD1Q9H336 500 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 SLITRK6Q9H5Y7 841 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
RFFL-204ENST00000414419 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
RFFL-204ENST00000414419 MAPK8IP1Q9UQF2 711 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
RFFL-204ENST00000414419 PTPRJQ12913 1337 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms