RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
HOXD3-202ENST00000410016 CD2APQ9Y5K6 639 aa16.8■□□□□ 0.28
HOXD3-202ENST00000410016 ACTL7BQ9Y614 415 aa16.8■□□□□ 0.28
HOXD3-202ENST00000410016 TOM1L1O75674 476 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 TJP3O95049 919 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CALB1P05937 261 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 STAT5BP51692 787 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 MCL1Q07820 350 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 PARP9Q8IXQ6 854 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 ALLCQ8N6M5 410 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CD248Q9HCU0 757 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CISHQ9NSE2 258 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 ABLIM1O14639 778 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 DNALI1O14645 258 aaPredicted RBP16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CLGNO14967 610 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 MGRN1O60291 552 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 EDNRBP24530 442 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 GCAP28676 217 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CDH5P33151 784 aaPredicted RBP16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CETN2P41208 172 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 OASLQ15646 514 aaKnown RBP16.79■□□□□ 0.28
HOXD3-202ENST00000410016 WDR72Q3MJ13 1102 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 NUGGCQ68CJ6 796 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 SPOCD1Q6ZMY3 1216 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 TFAP2BQ92481 460 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
HOXD3-202ENST00000410016 DRG1Q9Y295 367 aaKnown RBP16.79■□□□□ 0.28
HOXD3-202ENST00000410016 CHUKO15111 745 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 ETS1P14921 441 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 ATF7P17544 494 aaPredicted RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 PTPN7P35236 360 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 COPS2P61201 443 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 ZNF394Q53GI3 561 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 SH3D19Q5HYK7 790 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 CCHCR1Q8TD31 782 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 ACO2Q99798 780 aaKnown RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 ZNF518BQ9C0D4 1074 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 KRT1P04264 644 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 EFNA5P52803 228 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 SGSM1Q2NKQ1 1148 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 GALNTL6Q49A17 601 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 NOL9Q5SY16 702 aaKnown RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 CYP4F22Q6NT55 531 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 GPAT2Q6NUI2 795 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 LBX2Q6XYB7 198 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 APOBEC3FQ8IUX4 373 aaKnown RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 TMEM35BQ8NCS4 154 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 TCHPQ9BT92 498 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
HOXD3-202ENST00000410016 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 AGAP1Q9UPQ3 857 aa16.78■□□□□ 0.28
HOXD3-202ENST00000410016 SOWAHBA6NEL2 793 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 WEE2P0C1S8 567 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 PECAM1P16284 738 aaPredicted RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 EIF4BP23588 611 aaKnown RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 CDKN2BP42772 138 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 ARSEP51690 589 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 PIGHQ14442 188 aaPredicted RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 DUOXA2Q1HG44 320 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 CDCA2Q69YH5 1023 aaPredicted RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 DNAJC24Q6P3W2 148 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 NIPA2Q8N8Q9 360 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 NKD2Q969F2 451 aaPredicted RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 XYLT2Q9H1B5 865 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 TPX2Q9ULW0 747 aaKnown RBP16.77■□□□□ 0.28
HOXD3-202ENST00000410016 PCDHGC3Q9UN70 934 aa16.77■□□□□ 0.28
HOXD3-202ENST00000410016 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.27
HOXD3-202ENST00000410016 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.27
HOXD3-202ENST00000410016 ELF3P78545 371 aaPredicted RBP16.77■□□□□ 0.27
HOXD3-202ENST00000410016 FASTKD3Q14CZ7 662 aaKnown RBP16.77■□□□□ 0.27
HOXD3-202ENST00000410016 FAM133BQ5BKY9 247 aaKnown RBP16.77■□□□□ 0.27
HOXD3-202ENST00000410016 TFDP3Q5H9I0 405 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 DCUN1D2Q6PH85 259 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 ARHGEF18Q6ZSZ5 1173 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 CEP128Q6ZU80 1094 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 ACSF2Q96CM8 615 aaPredicted RBP16.77■□□□□ 0.27
HOXD3-202ENST00000410016 MAGEB18Q96M61 343 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 CFAP57Q96MR6 1250 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 SAYSD1Q9NPB0 183 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 BTBD7Q9P203 1132 aa16.77■□□□□ 0.27
HOXD3-202ENST00000410016 SSC5DA1L4H1 1573 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 C3orf70A6NLC5 250 aaPredicted RBP16.76■□□□□ 0.27
HOXD3-202ENST00000410016 RASA4BC9J798 803 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 OGTO15294 1046 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 RASA4O43374 803 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 SUN1O94901 812 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 UBOX5O94941 541 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 VCPP55072 806 aaKnown RBP16.76■□□□□ 0.27
HOXD3-202ENST00000410016 GPS1Q13098 491 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 SNCBQ16143 134 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms