RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLFN14P0C7P3 912 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 CMA1P23946 247 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 GPC5P78333 572 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 MYO1EQ12965 1108 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 PSMD2Q13200 908 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 DUOXA2Q1HG44 320 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 FAM26FQ5R3K3 315 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 EPM2AIP1Q7L775 607 aaPredicted RBP15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 EFCAB13Q8IY85 973 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 CSGALNACT2Q8N6G5 542 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 ATOH1Q92858 354 aaPredicted RBP15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 MCRS1Q96EZ8 462 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 CBWD1Q9BRT8 395 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 ZCWPW1Q9H0M4 648 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 TRPV4Q9HBA0 871 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 TRPV5Q9NQA5 729 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 ARHGEF3Q9NR81 526 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 GDAP2Q9NXN4 497 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 CEP72Q9P209 647 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 SIT1Q9Y3P8 196 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 KRBA1A5PL33 1030 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 PPEF2O14830 753 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 HUS1O60921 280 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 FAM163BP0C2L3 166 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 KRT85P78386 507 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 DNM1Q05193 864 aaKnown RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 EHHADHQ08426 723 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 NFE2Q16621 373 aaPredicted RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 SLC5A9Q2M3M2 681 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 SLC44A4Q53GD3 710 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 FOXD4L5Q5VV16 416 aaPredicted RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 CWF19L1Q69YN2 538 aaKnown RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 HS2ST1Q7LGA3 356 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 CCDC105Q8IYK2 499 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 GOLGA5Q8TBA6 731 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 TMEM174Q8WUU8 243 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 FOXD4L4Q8WXT5 416 aaPredicted RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 SMARCD2Q92925 531 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 PSMG2Q969U7 264 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 SAAL1Q96ER3 474 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 ANKRD36BP1Q96IX9 119 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 ACBD6Q9BR61 282 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 RPP25Q9BUL9 199 aaKnown RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 SCAND2PQ9GZW5 306 aaPredicted RBP15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 AGAP1Q9UPQ3 857 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 YIPF1Q9Y548 306 aa15.66■□□□□ 0.1
NIF3L1-205ENST00000409588 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 SOBPA7XYQ1 873 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 NCAM2O15394 837 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 TNNC2P02585 160 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 ITGB3P05106 788 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 TMEM191BP0C7N4 346 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 WEE1P30291 646 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 MAGEA9P43362 315 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 LHX1P48742 406 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 MRE11P49959 708 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 MLLT6P55198 1093 aaPredicted RBP15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 TSPY1Q01534 308 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 VEPH1Q14D04 833 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 BMT2Q1RMZ1 405 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 DNAJB7Q7Z6W7 309 aaPredicted RBP15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 ALYREFQ86V81 257 aaKnown RBP15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 C12orf56Q8IXR9 622 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 TOP6BLQ8N6T0 577 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 C1orf127Q8N9H9 656 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 DEPDC1BQ8WUY9 529 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 DNASE1L2Q92874 299 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 IRF7Q92985 503 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 ASB16Q96NS5 453 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 PGLYRP2Q96PD5 576 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 HS3ST6Q96QI5 342 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 IKZF4Q9H2S9 585 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 PCIF1Q9H4Z3 704 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 INTS13Q9NVM9 706 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 HSPBP1Q9NZL4 362 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 CA14Q9ULX7 337 aa15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
NIF3L1-205ENST00000409588 KANSL1LA0AUZ9 987 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 PROB1E7EW31 1015 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 VNN2O95498 520 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 OR4Q2P0C623 313 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 MYL4P12829 197 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 GLULP15104 373 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 CEBPBP17676 345 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 PSMC3P17980 439 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 POLR2BP30876 1174 aaKnown RBP15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 MYL7Q01449 175 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 FOXD4L6Q3SYB3 417 aaPredicted RBP15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 SLC39A12Q504Y0 691 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 FAM78AQ5JUQ0 283 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 WSCD1Q658N2 575 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 C1orf228Q6PIY5 440 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 FOXD4L3Q6VB84 417 aaPredicted RBP15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 WDR49Q8IV35 697 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 KMT2EQ8IZD2 1858 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 DTWD2Q8NBA8 298 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 ATAD1Q8NBU5 361 aa15.64■□□□□ 0.09
NIF3L1-205ENST00000409588 ING5Q8WYH8 240 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms