RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CACNA2D3Q8IZS8 1091 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 SHCBP1Q8NEM2 672 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 OR2W6PQ8NHA6 318 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ST6GALNAC4Q9H4F1 302 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 POLIQ9UNA4 740 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 TSPY1Q01534 308 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 PTPN11Q06124 597 aaPredicted RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ITKQ08881 620 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 GOLGA7BQ2TAP0 167 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ARL13BQ3SXY8 428 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 MFSD14AQ96MC6 490 aa14.81□□□□□ -0.04
SCAF4-202ENST00000399804 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 MAFBQ9Y5Q3 323 aaPredicted RBP14.81□□□□□ -0.04
SCAF4-202ENST00000399804 THPOP40225 353 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 CAV1Q03135 178 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.8□□□□□ -0.045e-7■■■□□ 16
SCAF4-202ENST00000399804 ZBTB10Q96DT7 871 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 SMC6Q96SB8 1091 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 ACO2Q99798 780 aaKnown RBP14.8□□□□□ -0.04
SCAF4-202ENST00000399804 NRAPQ86VF7 1730 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 CPP00450 1065 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 AKAP5P24588 427 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 COILP38432 576 aaPredicted RBP14.8□□□□□ -0.04
SCAF4-202ENST00000399804 MSH2P43246 934 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 TAF6P49848 677 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 SP2Q02086 613 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 CD302Q8IX05 232 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 KIAA0319LQ8IZA0 1049 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 DNAAF3Q8N9W5 541 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 ASB7Q9H672 318 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 CST8O60676 142 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 SASH3O75995 380 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 JADE1Q6IE81 842 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 EMC1Q8N766 993 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 CDT1Q9H211 546 aa14.8□□□□□ -0.04
SCAF4-202ENST00000399804 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.8□□□□□ -0.04
SCAF4-202ENST00000399804 ATP8B3O60423 1300 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 A0A0B4J269 797 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 PROSCO94903 275 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 KRT10P13645 584 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 ARL4CP56559 192 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 EIF3EP60228 445 aaKnown RBP14.79□□□□□ -0.04
SCAF4-202ENST00000399804 PTENP60484 403 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 AMPD2Q01433 879 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 KCNT1Q5JUK3 1230 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
SCAF4-202ENST00000399804 ZBED3Q96IU2 234 aaPredicted RBP14.79□□□□□ -0.04
SCAF4-202ENST00000399804 RNPEPQ9H4A4 650 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 DDX60Q8IY21 1712 aaKnown RBP14.79□□□□□ -0.04
SCAF4-202ENST00000399804 TRIM66O15016 1216 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 VDRP11473 427 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 DRP2Q13474 957 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 ZKSCAN8Q15776 578 aaPredicted RBP14.79□□□□□ -0.04
SCAF4-202ENST00000399804 FYB2Q5VWT5 728 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 CRYGNQ8WXF5 182 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 ZIM3Q96PE6 472 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 TXNRD2Q9NNW7 524 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 RAB21Q9UL25 225 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 HOXD13P35453 343 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 BYSLQ13895 437 aaKnown RBP14.79□□□□□ -0.04
SCAF4-202ENST00000399804 MFSD10Q14728 455 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 C11orf63Q6NUN7 778 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 KRT35Q92764 455 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 TMEM176AQ96HP8 235 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 SALL4Q9UJQ4 1053 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 SHANK3Q9BYB0 1731 aa14.79□□□□□ -0.04
SCAF4-202ENST00000399804 GJB6O95452 261 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 FKBP1BP68106 108 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 SV2CQ496J9 727 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 BZW1Q7L1Q6 419 aaKnown RBP14.78□□□□□ -0.04
SCAF4-202ENST00000399804 ATP6V1G3Q96LB4 118 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 GLT1D1Q96MS3 346 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 NIFKQ9BYG3 293 aaKnown RBP14.78□□□□□ -0.04
SCAF4-202ENST00000399804 RASSF4Q9H2L5 321 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 LAMA4Q16363 1823 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 CHD4Q14839 1912 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 ADSSP30520 456 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 PSMC4P43686 418 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 FMO1Q01740 532 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 ZBTB41Q5SVQ8 909 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 VSIG1Q86XK7 387 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 CCDC110Q8TBZ0 833 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 C9orf72Q96LT7 481 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 NTPCRQ9BSD7 190 aaKnown RBP14.78□□□□□ -0.04
SCAF4-202ENST00000399804 ZNF518BQ9C0D4 1074 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 KLC2Q9H0B6 622 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 TNFSF13BQ9Y275 285 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 SCN7AQ01118 1682 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 SLC15A5A6NIM6 579 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 PYGMP11217 842 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 FECHP22830 423 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 MXRA7P84157 204 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 ATP2A3Q93084 1043 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 SLC38A7Q9NVC3 462 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 HES2Q9Y543 173 aa14.78□□□□□ -0.04
SCAF4-202ENST00000399804 F5H423 210 aaPredicted RBP14.77□□□□□ -0.04
SCAF4-202ENST00000399804 PSEN2P49810 448 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 ROR1Q01973 937 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms