RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 A8MXQ7 604 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 RBP3P10745 1247 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 KRT10P13645 584 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 GLRA2P23416 452 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 DUPD1Q68J44 220 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 AADACL2Q6P093 401 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 RSPH3Q86UC2 560 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 EPS8L3Q8TE67 593 aaKnown RBP6.91□□□□□ -1.3
BDNF-203ENST00000395978 SEMA4DQ92854 862 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 CFAP36Q96G28 342 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 SGSM3Q96HU1 749 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 HPDLQ96IR7 371 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 NT5C1AQ9BXI3 368 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 TRABDQ9H4I3 376 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 TTC4O95801 387 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 MARCKSL1P49006 195 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 NAA25Q14CX7 972 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 SPDYCQ5MJ68 293 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 SLFN11Q7Z7L1 901 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 PALB2Q86YC2 1186 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 ANKMY2Q8IV38 441 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 ZC3H3Q8IXZ2 948 aaKnown RBP6.91□□□□□ -1.3
BDNF-203ENST00000395978 GABPB2Q8TAK5 448 aaPredicted RBP6.91□□□□□ -1.3
BDNF-203ENST00000395978 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 PCDHB18PQ96TA0 734 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 MROH8Q9H579 483 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 RSAD1Q9HA92 442 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 PPCSQ9HAB8 311 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 PCYOX1Q9UHG3 505 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 LRP5O75197 1615 aa6.91□□□□□ -1.3
BDNF-203ENST00000395978 MYPNQ86TC9 1320 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 CXCL11O14625 94 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 CHUKO15111 745 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 SPAG7O75391 227 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 ITGB3P05106 788 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 UBA1P22314 1058 aaKnown RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 CDC42EP1Q00587 391 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 LY6KQ17RY6 165 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 SMTNL2Q2TAL5 461 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 ZNF484Q5JVG2 852 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 C1orf228Q6PIY5 440 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 SPATA21Q7Z572 469 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 GPRC5AQ8NFJ5 357 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 PPP4R1Q8TF05 950 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 TBC1D31Q96DN5 1066 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 THOC1Q96FV9 657 aaKnown RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 CYTH2Q99418 400 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 GMLQ99445 158 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 DCLK3Q9C098 648 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 TMEM134Q9H6X4 195 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 ADARB2Q9NS39 739 aaKnown RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 SMG5Q9UPR3 1016 aaKnown RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 FAM47DPA6NHR8 397 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 RIPK2O43353 540 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 PPFIA2O75334 1257 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 DCTN3O75935 186 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 KRT38O76015 456 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 PCK1P35558 622 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 MAP2K2P36507 400 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 RGS7P49802 495 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 COPS2P61201 443 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 E2F5Q15329 346 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 TFDP3Q5H9I0 405 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 RIBC1Q8N443 379 aaPredicted RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 PPM1NQ8N819 430 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 SPATA18Q8TC71 538 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 ACSF2Q96CM8 615 aaPredicted RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 PGM2Q96G03 612 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 TACO1Q9BSH4 297 aaKnown RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 DHX35Q9H5Z1 703 aaKnown RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 AJAP1Q9UKB5 411 aaPredicted RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 ARL2BPQ9Y2Y0 163 aa6.9□□□□□ -1.3
BDNF-203ENST00000395978 USP15Q9Y4E8 981 aaPredicted RBP6.9□□□□□ -1.3
BDNF-203ENST00000395978 SPDYE16A6NNV3 312 aaPredicted RBP6.9□□□□□ -1.31
BDNF-203ENST00000395978 AGPSO00116 658 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 SMAPO00193 183 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 PIK3R2O00459 728 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 ACKR2O00590 384 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 COPEO14579 308 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 DHX15O43143 795 aaKnown RBP6.9□□□□□ -1.31
BDNF-203ENST00000395978 ZNF862O60290 1169 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 GARSP41250 739 aaKnown RBP6.9□□□□□ -1.31
BDNF-203ENST00000395978 PPATQ06203 517 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 TWF2Q6IBS0 349 aaKnown RBP6.9□□□□□ -1.31
BDNF-203ENST00000395978 ABHD15Q6UXT9 468 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 FBXO16Q8IX29 292 aaPredicted RBP6.9□□□□□ -1.31
BDNF-203ENST00000395978 UBA3Q8TBC4 463 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.31
BDNF-203ENST00000395978 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 CRYGNQ8WXF5 182 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 TRIM55Q9BYV6 548 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 SPON1Q9HCB6 807 aa6.9□□□□□ -1.31
BDNF-203ENST00000395978 CACNA1SQ13698 1873 aa6.89□□□□□ -1.31
BDNF-203ENST00000395978 CCT8L1PA6NM43 557 aa6.89□□□□□ -1.31
BDNF-203ENST00000395978 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
BDNF-203ENST00000395978 CALCAP01258 141 aa6.89□□□□□ -1.31
BDNF-203ENST00000395978 STAG3L1P0CL83 205 aa6.89□□□□□ -1.31
BDNF-203ENST00000395978 GNAT1P11488 350 aa6.89□□□□□ -1.31
BDNF-203ENST00000395978 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms