RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ALCAMQ13740 583 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 RIF1Q5UIP0 2472 aaKnown RBP15.36■□□□□ 0.05
NELFE-201ENST00000375425 FOXD4L5Q5VV16 416 aaPredicted RBP15.36■□□□□ 0.05
NELFE-201ENST00000375425 WSCD1Q658N2 575 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 VITQ6UXI7 678 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 LRRTM3Q86VH5 581 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 BRSK2Q8IWQ3 736 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 FOXD4L4Q8WXT5 416 aaPredicted RBP15.36■□□□□ 0.05
NELFE-201ENST00000375425 PSMG2Q969U7 264 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 NELL2Q99435 816 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 CBWD1Q9BRT8 395 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 TMEM206Q9H813 350 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 LTB4R2Q9NPC1 389 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 HSFX1Q9UBD0 423 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 ASB3Q9Y575 518 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 MYH15Q9Y2K3 1946 aa15.36■□□□□ 0.05
NELFE-201ENST00000375425 SP9P0CG40 484 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 TARSP26639 723 aaKnown RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 GDI1P31150 447 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 E2F4Q16254 413 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 MGAT5BQ3V5L5 792 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 SV2CQ496J9 727 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 GAREM2Q75VX8 874 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 MAML2Q8IZL2 1156 aaPredicted RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 NOC3LQ8WTT2 800 aaKnown RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 CACTINQ8WUQ7 758 aaKnown RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 DNASE1L2Q92874 299 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 IRF7Q92985 503 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 SEPT5Q99719 369 aaPredicted RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 LRRC27Q9C0I9 530 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 TNMDQ9H2S6 317 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 ZNF334Q9HCZ1 680 aaPredicted RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 RBAKQ9NYW8 714 aaPredicted RBP15.35■□□□□ 0.05
NELFE-201ENST00000375425 AGAP1Q9UPQ3 857 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 R4GN57 208 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 COL4A3Q01955 1670 aa15.35■□□□□ 0.05
NELFE-201ENST00000375425 SHISA7A6NL88 538 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 HEPACAM2A8MVW5 462 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 NCAM2O15394 837 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 EXTL3O43909 919 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 YEATS4O95619 227 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 ITGB3P05106 788 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 POLR2BP30876 1174 aaKnown RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 PNPLA4P41247 253 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 SMARCB1Q12824 385 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 FOXD4L6Q3SYB3 417 aaPredicted RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 STXBP5Q5T5C0 1151 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 SCARA3Q6AZY7 606 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 FOXD4L3Q6VB84 417 aaPredicted RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 ITIH5Q86UX2 942 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 CSGALNACT2Q8N6G5 542 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 C1orf127Q8N9H9 656 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 GLIS3Q8NEA6 775 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 HPS3Q969F9 1004 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 CLDN23Q96B33 292 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 DHX58Q96C10 678 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 ZNF560Q96MR9 790 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 ATXN3LQ9H3M9 355 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 SPATA6Q9NWH7 488 aaPredicted RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 MRPS17Q9Y2R5 130 aaKnown RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 ZNF263O14978 683 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 CUTAO60888 179 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 GABRR2P28476 465 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 AMPD3Q01432 767 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 FZD5Q13467 585 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 SHC4Q6S5L8 630 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 ARID3BQ8IVW6 561 aaPredicted RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 DCP1BQ8IZD4 617 aaKnown RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 IQUBQ8NA54 791 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 FAM200AQ8TCP9 573 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 KCNG4Q8TDN1 519 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 C2orf15Q8WU43 125 aaKnown RBP15.34■□□□□ 0.05
NELFE-201ENST00000375425 E2F7Q96AV8 911 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 FAM84AQ96KN4 292 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 LPIN3Q9BQK8 851 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 SEMA4AQ9H3S1 761 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 CUEDC2Q9H467 287 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 PDE11AQ9HCR9 933 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 TRPV5Q9NQA5 729 aa15.34■□□□□ 0.05
NELFE-201ENST00000375425 SCN1AP35498 2009 aa15.33■□□□□ 0.05
NELFE-201ENST00000375425 NCANO14594 1321 aa15.33■□□□□ 0.05
NELFE-201ENST00000375425 MAN2B1O00754 1011 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 LAMTOR5O43504 91 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 FGF19O95750 216 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 LMNAP02545 664 aaKnown RBP15.33■□□□□ 0.04
NELFE-201ENST00000375425 HSP90AA1P07900 732 aaKnown RBP15.33■□□□□ 0.04
NELFE-201ENST00000375425 KRT19P08727 400 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 ZSCAN22P10073 491 aaPredicted RBP15.33■□□□□ 0.04
NELFE-201ENST00000375425 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
NELFE-201ENST00000375425 ATF6P18850 670 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 MAGEA9P43362 315 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 VEPH1Q14D04 833 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 STXBP4Q6ZWJ1 553 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms