RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TMEM62Q0P6H9 643 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 CALCOCO2Q13137 446 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 DNAJC24Q6P3W2 148 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 SRLQ86TD4 932 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 C1orf127Q8N9H9 656 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 GPRC5AQ8NFJ5 357 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 ART4Q93070 314 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 SDCBP2Q9H190 292 aa16.95■□□□□ 0.3
CNKSR1-202ENST00000374253 PIK3R2O00459 728 aa16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 CYTH4Q9UIA0 394 aa16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 SCINQ9Y6U3 715 aa16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 AP3M2P53677 418 aa16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 IFI35P80217 286 aaPredicted RBP16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 C10orf67Q8IYJ2 551 aa16.94■□□□□ 0.3
CNKSR1-202ENST00000374253 TMEM191CA6NGB0 347 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 ASB14A6NK59 587 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 E7EVH7 732 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 ADCY8P40145 1251 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 ITGA8P53708 1063 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 KLF1Q13351 362 aaPredicted RBP16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 SMTNL2Q2TAL5 461 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 CCDC38Q502W7 563 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 MAMDC4Q6UXC1 1216 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 MFSD7Q6UXD7 560 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 ERICH1Q86X53 443 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 TMEM35BQ8NCS4 154 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 NLRP7Q8WX94 980 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 AAASQ9NRG9 546 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 FOXO6A8MYZ6 492 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 BTBD19C9JJ37 291 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 KRT1P04264 644 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 SF3A3Q12874 501 aaKnown RBP eCLIP16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 PTGISQ16647 500 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 PTPN20Q4JDL3 420 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 EMC1Q8N766 993 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 GLIS1Q8NBF1 620 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 VCPIP1Q96JH7 1222 aa16.93■□□□□ 0.3
CNKSR1-202ENST00000374253 ANK1P16157 1881 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 MYO1CO00159 1063 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 RIPK2O43353 540 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 PSTPIP1O43586 416 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 B4GALT4O60513 344 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 ARF4P18085 180 aaPredicted RBP16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 PPP2R2AP63151 447 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 GRM1Q13255 1194 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 ZNF667Q5HYK9 610 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 KCNT1Q5JUK3 1230 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 RAPGEF5Q92565 580 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 CDC42EP4Q9H3Q1 356 aaKnown RBP16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 PDZD7Q9H5P4 517 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 SLC12A6Q9UHW9 1150 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 TNFSF13BQ9Y275 285 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 CCL15-CCL14A0A0B4J2E2 113 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 ZSCAN5DPP0CG00 497 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 ETS1P14921 441 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 PHKA2P46019 1235 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 SLC26A2P50443 739 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 NFX1Q12986 1120 aaKnown RBP16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 CCL15Q16663 113 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 AMHR2Q16671 573 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 LDLRAD1Q5T700 205 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 GSTA5Q7RTV2 222 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 KATNAL2Q8IYT4 538 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 JOSD2Q8TAC2 188 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 PARP2Q9UGN5 583 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 IP6K2Q9UHH9 426 aa16.92■□□□□ 0.3
CNKSR1-202ENST00000374253 IVDP26440 423 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 RFC1P35251 1148 aaPredicted RBP16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 LONRF1Q17RB8 773 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 SELENOSQ9BQE4 189 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 EPN3Q9H201 632 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 C10orf88Q9H8K7 445 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 ZWILCHQ9H900 591 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 SAE1Q9UBE0 346 aaPredicted RBP16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 PPME1Q9Y570 386 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 GH1P01241 217 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 CALB1P05937 261 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 NUDT17P0C025 328 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 ATF2P15336 505 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 POLR2BP30876 1174 aaKnown RBP16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 DYNLT1P63172 113 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 LAMC2Q13753 1193 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 SURF1Q15526 300 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 AGBL2Q5U5Z8 902 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 DPP9Q86TI2 863 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 EXOC8Q8IYI6 725 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 KIAA0319LQ8IZA0 1049 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 ZC3H15Q8WU90 426 aaKnown RBP16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 PRMT7Q9NVM4 692 aaPredicted RBP16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 DNPEPQ9ULA0 475 aa16.91■□□□□ 0.3
CNKSR1-202ENST00000374253 TCRBV5S1A1TA0A578 114 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms