RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CATSPER1Q8NEC5 780 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 ZNF507Q8TCN5 953 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 TRAPPC3O43617 180 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 KLHL2O95198 593 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 ENO1P06733 434 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 MAPTP10636 758 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 SMTNL2Q2TAL5 461 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 TMEM119Q4V9L6 283 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 LRRC6Q86X45 466 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 RNF135Q8IUD6 432 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 PPHLN1Q8NEY8 458 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 PPP1R2P1Q96PQ5 205 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 EML4Q9HC35 981 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 KIAA1257Q9ULG3 409 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 MST1RQ04912 1400 aa17.89■□□□□ 0.45
TRAPPC11-201ENST00000334690 POLBP06746 335 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 TMCO4Q5TGY1 634 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 OLFM3Q96PB7 478 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 KCNK16Q96T55 309 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 ING2Q9H160 280 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 OSGEPQ9NPF4 335 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 FAM49BQ9NUQ9 324 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 DDTLA6NHG4 134 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 E2F6O75461 281 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 PDGFRBP09619 1106 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 GMPSP49915 693 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 ALDH18A1P54886 795 aaKnown RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 EZH2Q15910 746 aaKnown RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 C11orf63Q6NUN7 778 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 PCMTD2Q9NV79 361 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 ABT1Q9ULW3 272 aaKnown RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 DFFAO00273 331 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 GLI1P08151 1106 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 SHMT1P34896 483 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 SMAD1Q15797 465 aaKnown RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 HABP4Q5JVS0 413 aaKnown RBP17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 NCLNQ969V3 563 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 H3BQF6 201 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 CES2O00748 559 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 SYCP2LQ5T4T6 812 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 MFSD14CQ5VZR4 134 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 CXorf38Q8TB03 319 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 TAS1R2Q8TE23 839 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 TLR10Q9BXR5 811 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 YIPF3Q9GZM5 350 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 NSMCE4AQ9NXX6 385 aa17.88■□□□□ 0.45
TRAPPC11-201ENST00000334690 DYNC1LI2O43237 492 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 MCF2P10911 925 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 PCSK1P29120 753 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 PTENP60484 403 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 LAMC2Q13753 1193 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 ANO4Q32M45 955 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 PARD3BQ8TEW8 1205 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 SLC38A7Q9NVC3 462 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 UBA6A0AVT1 1052 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 ARHGAP10A1A4S6 786 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 RRM1P23921 792 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 IMPG1Q17R60 797 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 TTC39BQ5VTQ0 682 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 LONP2Q86WA8 852 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 LRRC34Q8IZ02 419 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 FAM71DQ8N9W8 422 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 MTBPQ96DY7 904 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 KLF6Q99612 283 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 KATNAL1Q9BW62 490 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 METTL5Q9NRN9 209 aaKnown RBP17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 PJA2O43164 708 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 PROSCO94903 275 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 AARSP49588 968 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 DNAJC3Q13217 504 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 PCNX4Q63HM2 1172 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 SV2AQ7L0J3 742 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 AGR3Q8TD06 166 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 SLC35C1Q96A29 364 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 TSPAN17Q96FV3 270 aa17.87■□□□□ 0.45
TRAPPC11-201ENST00000334690 EEF1DP29692 281 aaKnown RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 TCF7P36402 384 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 PSMC6P62333 389 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 SNAPC2Q13487 334 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 SV2CQ496J9 727 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 EXD1Q8NHP7 514 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 MARCOQ9UEW3 520 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 RASSF10A6NK89 507 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 EEF2KO00418 725 aaKnown RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 CTCFP49711 727 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 USP10Q14694 798 aaKnown RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 TFDP3Q5H9I0 405 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 RNF219Q5W0B1 726 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 ATG4AQ8WYN0 398 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 E2F7Q96AV8 911 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 MANSC1Q9H8J5 431 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 TJP2Q9UDY2 1190 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 SUPT20HL2P0C7V6 817 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 PNPLA4P41247 253 aa17.86■□□□□ 0.45
TRAPPC11-201ENST00000334690 SLC16A10Q8TF71 515 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms