RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 ARF4P18085 180 aaPredicted RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 SYT15Q9BQS2 421 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 HOMER3Q9NSC5 361 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 NFICP08651 508 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 KLRC2P26717 231 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 E4F1Q66K89 784 aaPredicted RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 IL31Q6EBC2 164 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 PGBD3Q8N328 593 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 EDEM1Q92611 657 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 PFDN4Q9NQP4 134 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 DUSP10Q9Y6W6 482 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 PFDN6O15212 129 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 COMTP21964 271 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 STX2P32856 288 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 IFNAR2P48551 515 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 PPP3CAQ08209 521 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 NCAPHQ15003 741 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 MAPRE1Q15691 268 aaKnown RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 NAB2Q15742 525 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 STKLD1Q8NE28 680 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 PYROXD1Q8WU10 500 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 RNF14Q9UBS8 474 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 PLAGL2Q9UPG8 496 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 SARSP49591 514 aaKnown RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 IRX4P78413 519 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 ZNF235Q14590 738 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 TDRD10Q5VZ19 366 aaKnown RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 DDX53Q86TM3 631 aaKnown RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 NOP9Q86U38 636 aaKnown RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 ASB7Q9H672 318 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 FAM114A2Q9NRY5 505 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 GTF3C4Q9UKN8 822 aa17.63■□□□□ 0.41
LMNB2-201ENST00000325327 ZMYND8Q9ULU4 1186 aaPredicted RBP17.63■□□□□ 0.41
LMNB2-201ENST00000325327 RRP9O43818 475 aaKnown RBP17.62■□□□□ 0.41
LMNB2-201ENST00000325327 MYL4P12829 197 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 PTENP60484 403 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 GPS1Q13098 491 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 DRP2Q13474 957 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 ARSHQ5FYA8 562 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 SLAIN1Q8ND83 568 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 AFAP1L1Q8TED9 768 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 RMDN1Q96DB5 314 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 FMO2Q99518 471 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 TSPYL2Q9H2G4 693 aaPredicted RBP17.62■□□□□ 0.41
LMNB2-201ENST00000325327 KANSL3Q9P2N6 904 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 ALG6Q9Y672 507 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 KPNA7A9QM74 516 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 BRD3Q15059 726 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 PCGF5Q86SE9 256 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 FAM131BQ86XD5 332 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 C4orf32Q8N8J7 132 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 KLC2Q9H0B6 622 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 TRMT13Q9NUP7 481 aaKnown RBP17.62■□□□□ 0.41
LMNB2-201ENST00000325327 IGLV3-22A0A075B6J6 115 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 AMHP03971 560 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 RRM1P23921 792 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 EPHB2P29323 1055 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 RAB27AP51159 221 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 RASAL3Q86YV0 1011 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 IFT43Q96FT9 208 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 PACSIN1Q9BY11 444 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 FGFBP2Q9BYJ0 223 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 SRRDQ9UH36 339 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 AMACRQ9UHK6 382 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 LRRIQ3A6PVS8 624 aaPredicted RBP17.62■□□□□ 0.41
LMNB2-201ENST00000325327 IGF2BP3O00425 579 aaKnown RBP eCLIP17.62■□□□□ 0.41
LMNB2-201ENST00000325327 SOCS7O14512 581 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 GSTA1P08263 222 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 GSTA2P09210 222 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 BMP6P22004 513 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 SP100P23497 879 aaPredicted RBP17.62■□□□□ 0.41
LMNB2-201ENST00000325327 EFEMP1Q12805 493 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 TMEM176AQ96HP8 235 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 CEP290O15078 2479 aa17.62■□□□□ 0.41
LMNB2-201ENST00000325327 ENDOD1O94919 500 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 FSTL1Q12841 308 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 ARHGEF19Q8IW93 802 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 GSPT2Q8IYD1 628 aaKnown RBP17.61■□□□□ 0.41
LMNB2-201ENST00000325327 TTC13Q8NBP0 860 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 ASIC4Q96FT7 647 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 DDX27Q96GQ7 796 aaKnown RBP17.61■□□□□ 0.41
LMNB2-201ENST00000325327 SENP8Q96LD8 212 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 TSR3Q9UJK0 312 aaKnown RBP17.61■□□□□ 0.41
LMNB2-201ENST00000325327 CCZ1BP86790 482 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 CCZ1P86791 482 aaPredicted RBP17.61■□□□□ 0.41
LMNB2-201ENST00000325327 NAA30Q147X3 362 aaPredicted RBP17.61■□□□□ 0.41
LMNB2-201ENST00000325327 SH3D19Q5HYK7 790 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 OR6P1Q8NGX9 317 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 MRPS31Q92665 395 aaKnown RBP17.61■□□□□ 0.41
LMNB2-201ENST00000325327 ZFP42Q96MM3 310 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 TRPV6Q9H1D0 765 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 GOLGA2P5Q9HBQ8 144 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 SAYSD1Q9NPB0 183 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 MROH7Q68CQ1 1323 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 CNTNAP2Q9UHC6 1331 aa17.61■□□□□ 0.41
LMNB2-201ENST00000325327 ARIH2O95376 493 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms