RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 EPC1Q9H2F5 836 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 ST6GALNAC4Q9H4F1 302 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 ASB7Q9H672 318 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 ASB3Q9Y575 518 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 CLIC4Q9Y696 253 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 SDK1Q7Z5N4 2213 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 TCHHQ07283 1943 aa18.9■□□□□ 0.62
EXOSC4-201ENST00000316052 CHADO15335 359 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 PAX3P23760 479 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 ADSSP30520 456 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 SOX9P48436 509 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 FCHO2Q0JRZ9 810 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 GAS6Q14393 721 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 PTPAQ15257 358 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 SLC39A12Q504Y0 691 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 WDR44Q5JSH3 913 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 DYMQ7RTS9 669 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 LRRTM3Q86VH5 581 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 LPIN3Q9BQK8 851 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 DPP3Q9NY33 737 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 NCDNQ9UBB6 729 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 AGO2Q9UKV8 859 aaKnown RBP18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 C2CD2Q9Y426 696 aa18.89■□□□□ 0.61
EXOSC4-201ENST00000316052 CYB561D2O14569 222 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 GABRR2P28476 465 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 ABCD1P33897 745 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 MLLT6P55198 1093 aaPredicted RBP18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 KCNA1Q09470 495 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 GPR158Q5T848 1215 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 SLFN12LQ6IEE8 588 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 SFR1Q86XK3 245 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 YAF2Q8IY57 180 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 EFCAB13Q8IY85 973 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 KRI1Q8N9T8 703 aaKnown RBP18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 CSGALNACT1Q8TDX6 532 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 ZFYVE19Q96K21 471 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 STRA6Q9BX79 667 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 FAM126AQ9BYI3 521 aaPredicted RBP18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 IL21Q9HBE4 155 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 DLL3Q9NYJ7 618 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 HSFX1Q9UBD0 423 aa18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 SMG5Q9UPR3 1016 aaKnown RBP18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 NUP210Q8TEM1 1887 aaPredicted RBP18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 TPRP12270 2363 aaKnown RBP18.88■□□□□ 0.61
EXOSC4-201ENST00000316052 MED19A0JLT2 244 aaPredicted RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 SLC38A8A6NNN8 435 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 PPP1R37O75864 691 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 ATF6P18850 670 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 WNT7BP56706 349 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 PUM1Q14671 1186 aaKnown RBP eCLIP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 TXNDC11Q6PKC3 985 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 DGLUCYQ7Z3D6 616 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 ZSWIM2Q8NEG5 633 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 TTC8Q8TAM2 541 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 ATG2BQ96BY7 2078 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 CLIC6Q96NY7 704 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 SEPT5Q99719 369 aaPredicted RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 UPF2Q9HAU5 1272 aaKnown RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 RBM12Q9NTZ6 932 aaKnown RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 FBXO2Q9UK22 296 aaPredicted RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 DSEQ9UL01 958 aa18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 KIF26AQ9ULI4 1882 aaPredicted RBP18.87■□□□□ 0.61
EXOSC4-201ENST00000316052 DENND4CQ5VZ89 1909 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 MYMKA6NI61 221 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 PRAMEF12O95522 483 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 TGM1P22735 817 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 TUFMP49411 452 aaKnown RBP18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 TAF6P49848 677 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 CYP4F8P98187 520 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 SATB1Q01826 763 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 CUL4AQ13619 759 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 RSPO4Q2I0M5 234 aaPredicted RBP18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 MGAT5BQ3V5L5 792 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 SCARA3Q6AZY7 606 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 FAM173BQ6P4H8 233 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 ITIH5Q86UX2 942 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 FAM200AQ8TCP9 573 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 GIPC2Q8TF65 315 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 POMGNT1Q8WZA1 660 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 DNAJC19Q96DA6 116 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 IER2Q9BTL4 223 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 GTSE1Q9NYZ3 720 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 TBC1D7Q9P0N9 293 aa18.86■□□□□ 0.61
EXOSC4-201ENST00000316052 ZNF638Q14966 1978 aaKnown RBP18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 MYBPHLA2RUH7 354 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 FGF19O95750 216 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 CXCL12P48061 93 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 CCR3P51677 355 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 POU5F1Q01860 360 aaKnown RBP18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 METTL23Q86XA0 190 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 THEM5Q8N1Q8 247 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 SLC46A2Q9BY10 475 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 TASP1Q9H6P5 420 aa18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 C8orf33Q9H7E9 229 aaPredicted RBP18.85■□□□□ 0.61
EXOSC4-201ENST00000316052 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms