RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 ADM5C9JUS6 153 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
CCDC8-201ENST00000307522 HOXD13P35453 343 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
CCDC8-201ENST00000307522 AP3B2Q13367 1082 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 MPP3Q13368 585 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 DUS1LQ6P1R4 473 aaKnown RBP17.11■□□□□ 0.33
CCDC8-201ENST00000307522 PAOXQ6QHF9 649 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 LCA5Q86VQ0 697 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 RBM12BQ8IXT5 1001 aaKnown RBP17.11■□□□□ 0.33
CCDC8-201ENST00000307522 INPP5DQ92835 1189 aa17.11■□□□□ 0.33
CCDC8-201ENST00000307522 GOLGA8IPA6NC78 632 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 GOLGA8JA6NMD2 632 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 FASTKD3Q14CZ7 662 aaKnown RBP17.1■□□□□ 0.33
CCDC8-201ENST00000307522 EPHA7Q15375 998 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 MAPK6Q16659 721 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 RMDN3Q96TC7 470 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
CCDC8-201ENST00000307522 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 HSFX1Q9UBD0 423 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 MRPL11Q9Y3B7 192 aaKnown RBP17.1■□□□□ 0.33
CCDC8-201ENST00000307522 KAT6AQ92794 2004 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 DCTN3O75935 186 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 DESP17661 470 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 PSMC4P43686 418 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 Q4G0T1 1027 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 RINT1Q6NUQ1 792 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 USP6NLQ92738 828 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 RUNDC3BQ96NL0 473 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 HERPUD2Q9BSE4 406 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
CCDC8-201ENST00000307522 BOLA2-SMG1P6H3BVE0 249 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 RPA1P27694 616 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 UGCGQ16739 394 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 SGO2Q562F6 1265 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 ODR4Q5SWX8 454 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 SNRNP48Q6IEG0 339 aaKnown RBP17.09■□□□□ 0.33
CCDC8-201ENST00000307522 RAPH1Q70E73 1250 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
CCDC8-201ENST00000307522 EXOC1LA0A1B0GW35 172 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 H3BRJ5 948 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 PODXLO00592 558 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 ADRA1DP25100 572 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 MRPS9P82933 396 aaKnown RBP17.09■□□□□ 0.33
CCDC8-201ENST00000307522 KDSRQ06136 332 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 ACAP1Q15027 740 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 LPCAT4Q643R3 524 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 LVRNQ6Q4G3 990 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 LRRC6Q86X45 466 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 EFCAB3Q8N7B9 438 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 CRYGNQ8WXF5 182 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 FNBP1Q96RU3 617 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 TRABDQ9H4I3 376 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 PDP2Q9P2J9 529 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 PPM1HQ9ULR3 514 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 LAMA3Q16787 3333 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
CCDC8-201ENST00000307522 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 GOLGA8MH3BSY2 632 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 MAGEA8P43361 318 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 OCRLQ01968 901 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 AP1B1Q10567 949 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 UBL4BQ8N7F7 174 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 OLIG1Q8TAK6 271 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 ANAPC5Q9UJX4 755 aa17.09■□□□□ 0.33
CCDC8-201ENST00000307522 EDF1O60869 148 aaKnown RBP17.08■□□□□ 0.33
CCDC8-201ENST00000307522 HAUS5O94927 633 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 ASMTLO95671 621 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 VAV1P15498 845 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 RRM1P23921 792 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.33
CCDC8-201ENST00000307522 PGM1P36871 562 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 SPDYCQ5MJ68 293 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 LLGL2Q6P1M3 1020 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 SLC5A5Q92911 643 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 AZIN2Q96A70 460 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 TMEM109Q9BVC6 243 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 ROPN1BQ9BZX4 212 aaPredicted RBP17.08■□□□□ 0.33
CCDC8-201ENST00000307522 RANBP17Q9H2T7 1088 aaKnown RBP17.08■□□□□ 0.33
CCDC8-201ENST00000307522 ROPN1Q9HAT0 212 aaPredicted RBP17.08■□□□□ 0.33
CCDC8-201ENST00000307522 KANSL3Q9P2N6 904 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 PARP2Q9UGN5 583 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 ZNF510Q9Y2H8 683 aa17.08■□□□□ 0.33
CCDC8-201ENST00000307522 R3HDM2Q9Y2K5 976 aaKnown RBP17.08■□□□□ 0.33
CCDC8-201ENST00000307522 ATP5HO75947 161 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 ITGA2BP08514 1039 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 ATP6V1B1P15313 513 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 ATP5DP30049 168 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 ACVR2BQ13705 512 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 SLC13A5Q86YT5 568 aaPredicted RBP17.08■□□□□ 0.32
CCDC8-201ENST00000307522 PYDC1Q8WXC3 89 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 SLC35C1Q96A29 364 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 BTBD10Q9BSF8 475 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 MEI4A8MW99 385 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms