RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ZNF473Q8WTR7 871 aaKnown RBP18.04■□□□□ 0.48
CDCP1-201ENST00000296129 N4BP2L2Q92802 583 aaPredicted RBP18.04■□□□□ 0.48
CDCP1-201ENST00000296129 ZSWIM1Q9BR11 485 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 PACSIN1Q9BY11 444 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDCP1-201ENST00000296129 TMEM247A6NEH6 219 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 NCAM1P13591 858 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 PNPLA4P41247 253 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 INPP1P49441 399 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 CXCL9Q07325 125 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 CUL3Q13618 768 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 MDH1BQ5I0G3 518 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 IL31Q6EBC2 164 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 WWP1Q9H0M0 922 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 E2F6O75461 281 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 PYGBP11216 843 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 PDK1Q15118 436 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 E2F4Q16254 413 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 ZNF484Q5JVG2 852 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 MPZL3Q6UWV2 235 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 RFX8Q6ZV50 586 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 ANKRD7Q92527 254 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 CPB2Q96IY4 423 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 DUSP10Q9Y6W6 482 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 TGFB2P61812 414 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 AGBL2Q5U5Z8 902 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 ZNF512Q96ME7 567 aaPredicted RBP18.04■□□□□ 0.48
CDCP1-201ENST00000296129 VTNP04004 478 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 KYNUQ16719 465 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 SYTL5Q8TDW5 730 aaPredicted RBP18.04■□□□□ 0.48
CDCP1-201ENST00000296129 PTPRN2Q92932 1015 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 PBXIP1Q96AQ6 731 aa18.04■□□□□ 0.48
CDCP1-201ENST00000296129 FAM200BP0CF97 657 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 C2CD6Q53TS8 623 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 FAM117BQ6P1L5 589 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 ZNF720Q7Z2F6 126 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 ARHGEF38Q9NXL2 777 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 UBQLN1Q9UMX0 589 aaKnown RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 E2F8A0AVK6 867 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 C3orf62Q6ZUJ4 267 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 ERO1BQ86YB8 467 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 ST13P4Q8IZP2 240 aaPredicted RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 CXorf38Q8TB03 319 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 TSSK1BQ9BXA7 367 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 MUC3BQ9H195 1237 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 NPHS2Q9NP85 383 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 LSM7Q9UK45 103 aaKnown RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 TMCC1O94876 653 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 PSMC6P62333 389 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 SREBF2Q12772 1141 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 SLC25A41Q8N5S1 370 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 TRIM54Q9BYV2 358 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 GFAPP14136 432 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 HERVK_113P62684 666 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 PDAP1Q13442 181 aaKnown RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 SLC13A5Q86YT5 568 aaPredicted RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 FBXL16Q8N461 479 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 SAMD3Q8N6K7 520 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 CATSPERBQ9H7T0 1116 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 PHF20L1A8MW92 1017 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 TLR2O60603 784 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 RAP1GAPP47736 663 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 USP10Q14694 798 aaKnown RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 PGM5Q15124 567 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 C20orf96Q9NUD7 363 aaPredicted RBP18.03■□□□□ 0.48
CDCP1-201ENST00000296129 ARL2BPQ9Y2Y0 163 aa18.03■□□□□ 0.48
CDCP1-201ENST00000296129 RBP3P10745 1247 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 KCNA2P16389 499 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 STMN1P16949 149 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 SERPINB9P50453 376 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 PMS1P54277 932 aaKnown RBP18.02■□□□□ 0.48
CDCP1-201ENST00000296129 AP2B1P63010 937 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 ZC3H15Q8WU90 426 aaKnown RBP18.02■□□□□ 0.48
CDCP1-201ENST00000296129 KRT35Q92764 455 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 CGRRF1Q99675 332 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 PRRG1O14668 218 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 PSTPIP1O43586 416 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 CYP11B1P15538 503 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 SOX10P56693 466 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 TTC23LQ6PF05 361 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 PLEKHH3Q7Z736 793 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 TRIML2Q8N7C3 387 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 FUCA2Q9BTY2 467 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 DYRK4Q9NR20 520 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 AIPL1Q9NZN9 384 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
CDCP1-201ENST00000296129 GARTP22102 1010 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 ARHGDIAP52565 204 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 FCGRTP55899 365 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 STOML1Q9UBI4 398 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 FAM47DPA6NHR8 397 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 STK25O00506 426 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 EIF3HO15372 352 aaKnown RBP eCLIP18.02■□□□□ 0.47
CDCP1-201ENST00000296129 ENO1P06733 434 aaKnown RBP18.02■□□□□ 0.47
CDCP1-201ENST00000296129 THPOP40225 353 aa18.02■□□□□ 0.47
CDCP1-201ENST00000296129 RGS2P41220 211 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms